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Table 3 Major gene products of Mannheimia haemolytica phage 3927AP2

From: Comparative analysis of multiple inducible phages from Mannheimia haemolytica

CDS Gene name Size (aa)/MW(kDa)/pI Motifsa Function % Identity (aa) to related Mu-like phagesb
      Su-Mu phiMhaMu2
1 c 242/26.8/5.2 S24_LexA-like (cd06529) Transcriptional regulatory protein 46.1 100
2 ner 75/8.4/9.8 HTH_Tnp_Mu_1 superfamily (cl15894) DNA-binding protein 41.6 100
3 A 645/73.1/9.3 Mu-transpos_C (pfam09299) Transposase 63.7 99.1
4 B 293/32.2/8.6 HTH_LacI (cd01392) Mu-like prophage FluMu DNA transposition protein B 54.6 100
14 gemA 141/16.1/9.9 DUF1018 (pfam06252) Mu-like prophage protein gp16 66 100
18 mor 141/16.0/7.5 Mor superfamily (cl02360) Mor transcription activator family protein 70.9 100
19 lys 177/19.8/7.7 Glyco_hydro_108 (pfam05838) and PG_binding_3 (pfam09374) Hypothetical protein 20 94.4
25 DNA-binding 166/18.4/6.1 TM (1) DNA-binding protein 48.5 100
27 terL 541/62.3/6.2 Terminase_6 (pfam03237) Terminase, large subunit 71.3 100
28 porT 541/59.9/5.2 COG4383 (COG4383) Portal protein 84 100
29 F 434/50.1/9.3 Phage_Mu_F (pfam04233) Phage head morphogenesis protein 73.6 100
30 G 138/15.3/5.8 COG5005 (COG5005) Mu-like prophage FluMu G protein 2 73.9 100
31 I 356/38.9/5.2 Mu-like_Pro (pfam10123) Bacteriophage Mu I protein Gp32 76.9 99.7
32 T 305/33.9/5.4 Mu-like_gpT (pfam10124) Major head subunit T 75.6 100
34 J/K 141/15.9/4.7 DUF1320 (pfam07030) Mu-like prophage protein gp36 71.5 100
35 J/K 213/23.6/5.9 DUF1834 (pfam08873) Mu-like prophage protein gp37 69.5 100
37 L 469/50.7/5.7 Phage_sheath_1 (pfam04984) Mu-like prophage FluMu tail sheath protein 74.1 85.1
38 M/Y 124/13.7/4.8 Tail_tube (pfam10618) Phage tail tube protein 75.8 NA
41 tmp 759/81.5/9.2 PhageMin_Tail (pfam10145) Tail length tape measure protein 64.2 100
42 N 430/48.6/5.4 DNA_circ_N (pfam07157) Mu-like DNA circularization protein 45.8 100
43 P 375/41.8/7.6 Phage_GPD superfamily (cl15796) Mu-like tail protein P 75 99.7
44 Q 219/22.8/6.9 Phage_Mu_Gp45 (pfam06890) Mu-like baseplate assembly protein 70.8 99.5
45 V 116/13.1/6.8 GP46 (pfam07409) Mu-like protein gp46 81.9 100
46 W 353/38.7/4.7 Baseplate_J superfamily (cl01294) Mu-like baseplate J protein 54.1 100
47 R 196/21.9/5.2 DUF2313 (pfam10076) Tail protein 35.8 99.5
48 S 686/75.7/5.9 Pectate_lyase_3 (pfam12708) Mu-like prophage FluMu defective tail fiber protein 20.6 NA
  1. aTM: transmembrane α-helice
  2. bIdentity of amino acids sequence was calculated by ALIGN [66]