Table 1 Isolates and genome subtyping results

F2-382

BAZC01000001–01000056

4b

N/A

1-3-1-3-1-3

13-18-9

This study

NIHS-28

BAZD01000001–01000036

4b

N/A

1-3-1-3-1-3

13-18-9

This study

F2365

NC_002973

4b

I

1-3-1-3-1-3

14-18-9

Nelson et al. [25]

EGDe

NC_003210

1/2a

II

7-9-8-6-4-2

25-11-7

Glaser et al. [26]

HCC23

NC_011660

4a

III

4-5-4-1-*-4

8-22-4

Steele et al. [27]

Clip80459

NC_012488

4b

I

2-4-2-5-2-3

15-20-5

Hain et al. [20]

08-5578

NC_013766

1/2a

II

7-8-7-6-3-1

34-22-7

Gilmour et al. [28]

08-5923

NC_013768

1/2a

II

7-8-7-6-3-1

34-22-7

Gilmour et al. [28]

L99

NC_017529

4a

III

4-5-4-1-*-4

8-22-4

Hain et al. [20]

M7

NC_017537

4a

N/A

5-5-4-1-*-4

8-22-4

Chen et al. [23]

10403S

NC_017544

1/2a

N/A

8-12-6-6-3-2

20-11-7

den Bakker et al. [29]

FSL R2-561

NC_017546

1/2c

N/A

7-9-8-6-4-2

21-11-7

den Bakker et al. [29]

Finland1998

NC_017547

1/2a

N/A

7-8-7-6-3-2

25-14-7

den Bakker et al. [29]

07PF0776

NC_017728

4b

N/A

2-4-2-5-2-3

14-18-9

McMullen et al. [24]

ATCC19117

NC_018584

4a

I

2-1-3-3-1-3

17-13-6

Kuenne et al. [21]

SLCC2378

NC_018585

4e

I

1-3-1-3-1-3

17-18-9

Kuenne et al. [21]

SLCC2540

NC_018586

3b

I

3-7-2-4-2-3

10-11-5

Kuenne et al. [21]

SLCC2755

NC_018587

1/2b

I

2-6-3-3-2-3

15-16-5

Kuenne et al. [21]

SLCC2479

NC_018589

3c

II

7-9-8-6-4-2

21-11-7

Kuenne et al. [21]

SLCC2376

NC_018590

4c

III

6-2-5-2-*-4

9-17-4

Kuenne et al. [21]

SLCC2482

NC_018591

7

I

2-6-3-3-2-3

15-16-6

Kuenne et al. [21]

SLCC5850

NC_018592

1/2a

II

*-10-6-6-3-2

19-11-7

Kuenne et al. [21]

SLCC7179

NC_018593

3a

II

7-11-6-6-3-2

10-12-9

Kuenne et al. [21]

L312

NC_018642

4b

I

2-4-2-5-2-3

15-15-5

Kuenne et al. [21]