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Table 1 Isolates and genome subtyping results

From: Genetic distance in the whole-genome perspective on Listeria monocytogenes strains F2-382 and NIHS-28 that show similar subtyping results

Isolates Genbank accession No. Serotype Lineage MVLSTa MLVA Reference
F2-382 BAZC01000001–01000056 4b N/A 1-3-1-3-1-3 13-18-9 This study
NIHS-28 BAZD01000001–01000036 4b N/A 1-3-1-3-1-3 13-18-9 This study
F2365 NC_002973 4b I 1-3-1-3-1-3 14-18-9 Nelson et al. [25]
EGDe NC_003210 1/2a II 7-9-8-6-4-2 25-11-7 Glaser et al. [26]
HCC23 NC_011660 4a III 4-5-4-1-*-4 8-22-4 Steele et al. [27]
Clip80459 NC_012488 4b I 2-4-2-5-2-3 15-20-5 Hain et al. [20]
08-5578 NC_013766 1/2a II 7-8-7-6-3-1 34-22-7 Gilmour et al. [28]
08-5923 NC_013768 1/2a II 7-8-7-6-3-1 34-22-7 Gilmour et al. [28]
L99 NC_017529 4a III 4-5-4-1-*-4 8-22-4 Hain et al. [20]
M7 NC_017537 4a N/A 5-5-4-1-*-4 8-22-4 Chen et al. [23]
10403S NC_017544 1/2a N/A 8-12-6-6-3-2 20-11-7 den Bakker et al. [29]
FSL R2-561 NC_017546 1/2c N/A 7-9-8-6-4-2 21-11-7 den Bakker et al. [29]
Finland1998 NC_017547 1/2a N/A 7-8-7-6-3-2 25-14-7 den Bakker et al. [29]
07PF0776 NC_017728 4b N/A 2-4-2-5-2-3 14-18-9 McMullen et al. [24]
ATCC19117 NC_018584 4a I 2-1-3-3-1-3 17-13-6 Kuenne et al. [21]
SLCC2378 NC_018585 4e I 1-3-1-3-1-3 17-18-9 Kuenne et al. [21]
SLCC2540 NC_018586 3b I 3-7-2-4-2-3 10-11-5 Kuenne et al. [21]
SLCC2755 NC_018587 1/2b I 2-6-3-3-2-3 15-16-5 Kuenne et al. [21]
SLCC2479 NC_018589 3c II 7-9-8-6-4-2 21-11-7 Kuenne et al. [21]
SLCC2376 NC_018590 4c III 6-2-5-2-*-4 9-17-4 Kuenne et al. [21]
SLCC2482 NC_018591 7 I 2-6-3-3-2-3 15-16-6 Kuenne et al. [21]
SLCC5850 NC_018592 1/2a II *-10-6-6-3-2 19-11-7 Kuenne et al. [21]
SLCC7179 NC_018593 3a II 7-11-6-6-3-2 10-12-9 Kuenne et al. [21]
L312 NC_018642 4b I 2-4-2-5-2-3 15-15-5 Kuenne et al. [21]
  1. aAsterisks (*) indicate that the genome region corresponding to the allele was not found.