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Table 3 Prevalence of pRS218 genes among neonatal meningitis causing E. coli and fecal commensal E. coli strains

From: Complete nucleotide sequence of pRS218, a large virulence plasmid, that augments pathogenic potential of meningitis-associated Escherichia coli strain RS218

Gene name Predicted function NMEC % FEC % Chi squire value P value Related pUTI89 locus
pRS218_007 Copper sensitivity 98.11 46.94 65.229 <0.0001 P007
pRS218_008 Copper sensitivity 96.23 22.45 113.187 <0.0001 P008
pRS218_010 Na+traslocation 100.00 18.37 133.182 <0.0001 P009
pRS218_013 Iron permease 98.11 28.57 105.105 <0.0001 P010
pRS218_014 Iron transport 100.00 57.14 51.864 <0.0001 P011
pRS218_015 Membrane protein 96.23 18.37 124.113 <0.0001 P012
pRS218_016 ABC transporter 100.00 24.49 117.051 <0.0001 P013
pRS218_017 Membrane protein 94.34 77.55 12.706 0.0004 P014
pRS218_018 ABC transporter 98.11 55.10 51.425 <0.0001 P015
pRS218_019 Putative thioredoxin precursor 83.02 18.37 20.529 <0.0001 P016
pRS218_020 Hypothetical protein 100.00 18.37 133.182 <0.0001 P017
pRS218_022 Glucose-1-phosphatase 100.00 75.51 24.428 <0.0001 P018
pRS218_023 Glucose-1-phosphatase 98.11 16.33 137.169 <0.0001 P018
pRS218_031 Hypothetical protein 98.11 26.53 107.541 <0.0001 P024
pRS218_034 Colicin immunity 84.91 91.84 2.407 0.1208 P023
pRS218_035 ColicinJ production 66.04 100.00 49.668 <0.0001 P027
pRS218_036 ColicinJ production 77.36 97.96 20.16 <0.0001 P028
pRS218_038 ColicinJ production 100.00 26.53 112.012 <0.0001 P029
pRS218_039 Enterotoxin 100.00 71.43 33.918 <0.0001 P030
pRS218_042 Hypothetical protein 98.11 44.90 68.924 <0.0001 P034
pRS218_056 Hypothetical protein 100.00 6.12 177.358 <0.0001 P042
pRS218_057 ColicinJ production 100.00 100.00 0 1 P043
pRS218_060 Hypothetical protein 96.23 10.20 148.454 <0.0001 P045
pRS218_063 Hypothetical protein 100.00 24.49 120 <0.0001 P051
pRS218_064 Hypothetical protein 100.00 0.00 197.04 <0.0001 P052
pRS218_073 Hypothetical protein 94.34 53.06 43.152 <0.0001 P060
pRS218_074 Stability protein StbA 90.57 20.41 102.055 <0.0001 P062
pRS218_079 Hypothetical protein 98.11 22.45 120.333 <0.0001 P042
pRS218_080 Unknown 100.00 100.00 0 1 P065
pRS218_082 Hypothetical protein 100.00 34.69 96.296 <0.0001 P068
pRS218_083 Transposase 98.11 22.45 120.333 <0.0001 P071
pRS218_086 Hypothetical protein 98.11 22.45 120.333 <0.0001 P072
pRS218_088 Adenine-specific methyltransferase 100.00 13.33 151.027 <0.0001 P074
pRS218_089 Cytoplasmic protein 83.02 73.47 2.914 0.0878 P075
pRS218_090 Hypothetical protein 30.19 48.98 7.553 0.006 P076
pRS218_091 Hypothetical protein 98.11 55.10 51.425 <0.0001 P078
pRS218_091 Hypothetical protein 100.00 36.73 91.971 <0.0001 P078
pRS218_092 Putative antirestriction protein 73.58 83.67 3.014 0.0826 P079
pRS218_093 Phage protein MubC 100.00 81.63 16.986 <0.0001 P080
pRS218_094 Hypothetical protein 98.11 57.14 48.201 <0.0001 P081
pRS218_095 Hypothetical protein 75.47 6.12 98.786 <0.0001 P083
pRS218_099 Hypothetical protein 90.57 34.69 67.267 <0.0001 P088
pRS218_100 Hypothetical protein 100.00 34.69 96.296 <0.0001 P089
pRS218_105 Cytoplasmic protein 75.47 93.88 13.781 0.0002 P093
pRS218_106 Hypothetical protein 96.23 32.65 86.669 <0.0001 P094
pRS218_107 Adenine-specific methyltransferase 100.00 32.65 100.086 <0.0001 P095
pRS218_109 Hok/Gef cell toxic protein 100.00 93.88 0 0.9944 P097
pRS218_110 Hypothetical protein 98.11 26.53 107.541 <0.0001 P099
pRS218_113 Hypothetical protein 100.00 83.67 17.391 <0.0001 P100
pRS218_113 Hypothetical protein 100.00 73.47 31.214 <0.0001 P100
pRS218_114 Unknown 100.00 44.90 72.93 <0.0001 P101
pRS218_116 X polypeptide 97.96 46.94 65.229 <0.0001 P102
pRS218_118 TraJ/conjugal transfer 43.40 10.20 27.955 <0.0001 P104
pRS218_131 Hypothetical protein 100.00 93.88 6.186 0.0129 P116
pRS218_136 TraU/conjugal transfer 100.00 42.86 79.72 <0.0001 P120
pRS218_154 TraI/conjugal transfer 81.13 53.06 17.73 <0.0001 P138
pRS218_156 Dienelactone hydrolase 90.57 73.47 20.195 <0.0001 P141
pRS218_159 Hypothetical protein 90.57 93.88 1.087 0.2971 P144
pRS218_190 Hemolysin expression modulating protein 90.57 12.24 124.932 <0.0001 P145
  1. P < 0.05 indicates a statistical significance.