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Table 2 Detection of fungal taxa from root tips of spruce and beech using different identification approaches.

From: Development and validation of an oligonucleotide microarray to characterise ectomycorrhizal fungal communities

Species name Morphotyping/ITS sequencing of individual ECM tips ITS cloning/sequencing of ECM tip pools Phylochip
samples from Picea abies    
Thelephora terrestris x x x
Cenococcum geophilum x x x
Clavulina cristata x x x
Atheliaceae (Piloderma) sp x x no oligonucleotide
Cortinarius sp 1 x x x
Xerocomus pruinatus x x x
Tomentellopsis submollis morphotyping only x x
Inocybe sp morphotyping only x x
Xerocomus badius x x x
Tylospora asterophora x x x
Tylospora fibrillosa x x x
Sebacina sp x   no oligonucleotide
Cortinarius sp 2    x
Russula integra    x
Cortinarius alboviolaceus    x
Cortinarius traganus    x
Amanita muscaria    x
Lactarius sp1 morphotyping only   
ECM from Fagus sylvatica    
Pezizales sp x x no oligonucleotide
Sebacinaceae sp x x no oligonucleotide
Laccaria amethystina x x x
Endophyte sp.   x no oligonucleotide
Inocybe napipes x x x
Xerocomus pruinatus x x x
Cortinarius sp 2 x x x
Cortinarius sp 3 x x x
Cortinarius tortuosus   x x
Russula puellaris x x x
Tomentellopsis submollis x x x
Laccaria laccata x x x
Cenococcum geophilum x   x
Cortinarius sp 1    x
Cortinarius hinnuleus    x
Russula integra    x
Laccaria bicolor    x
Amanita rubescens morphotyping only   
Lactarius sp2 morphotyping only   
Tomentella sp morphotyping only