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Table 2 F. tularensis strains used to evaluate SNP diagnostic markers

From: Whole genome single nucleotide polymorphism based phylogeny of Francisella tularensis and its application to the development of a strain typing assay

S. No. Isolate Subspecies Clade Geographic Source Year isolated
1 ND00-0952 type A A1 (A1a) North Dakota 2000
2 MO01-1907 type A A1 (A1a) Missouri 2001
3 AR00-0028 type A A1 (A1a) Arkansas 2000
4 KS00-0948 type A A1 (A1a) Kansas 2000
5 OK01-2528 type A A1 (A1a) Oklahoma 2001
6 CA00-0036 type A A1 (A1a) California 2000
7 AR98-2146 type A A1 (A1a) Arkansas 1998
8 GA02-5497 type A A1 (A1a) Virginia 1982
9 NC01-5379 type A A1 (A1b) North Carolina 2001
10 NY04-2787 type A A1 (A1b) New York 2004
11 AK96-2888 type A A1 (A1b) Alaska 1996
12 OK02-0195 type A A1 (A1b) Oklahoma 2002
13 PA04-2790 type A A1 (A1b) Pennsylvania 2004
14 CA04-2258 type A A1 (A1b) California 2004
15 GA02-5375 type A A1 (A1b) New York 1977
16 WY03-1228 type A A2 Wyoming 2003
17 CO01-3713 type A A2 Colorado 2001
18 UT07-4362 type A A2 Utah 2007
19 TX00-1591 type A A2 Texas 2000
20 GA02-5453 type A A2 Wyoming 1993
21 WY01-3911 type A A2 Wyoming 2001
22 NM99-0295 type A A2 New Mexico 1999
23 ID04-2687 type A A2 Oregon 2004
24 AZ00-1180 type B   Arizona 2000
25 AZ00-1324 type B   Arizona 2000
26 SP03-1782 type B   Spain 2003
27 WA98-1774 type B   Washington 1998
28 E3443 type B   Oregon 1978
29 SP98-2108 type B   Spain 1998
30 OR98-0719 type B   Oregon 1998
31 RC503 type B   Russia -
32 SP03-1783 type B   Spain 2003
33 CN98-5979 type B   Canada 1998
34 NY98-2295 type B   New York 1998
35 TX03-3834 type B   Mississippi 2003
36 IN00-2758 type B   Indiana 2000
37 F4853 type B   California 1983
38 OH01-3029 type B   Kansas 2001
39 CO05-3922 type B   Colorado 2005