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Table 3 Nucleotide (upper right) and deduced amino acid (lower left) sequence similarities (%) of full-length cadF (-like) gene in C. lari isolates and other thermo- philic Campylobacter reference strains

From: Structural analysis of the full-length gene encoding a fibronectin-binding-like protein (CadF) and its adjacent genetic loci within Campylobacter lari

  Campylobacter 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
1 C. lari JCM2530T   99.2 99.2 99.3 92.8 92.4 92.3 92.6 91.9 90.1 91.0 89.4 89.4 89.5 89.9 89.5 99.1 68.7 68.5 65.8 65.0
2 C. lari 298 98.8   99.8 99.9 92.9 92.5 92.4 92.7 92.0 90.0 91.2 89.4 89.4 89.5 89.9 89.5 99.8 68.8 68.6 65.8 65.4
3 C. lari 300 99.1 99.7   99.9 92.9 92.5 92.4 92.7 92.0 90.0 91.2 89.4 89.4 89.5 89.9 89.5 100.0 68.8 68.6 65.8 65.6
4 C. lari 84C-1 99.1 99.7 100.0   93.0 92.6 92.5 92.8 92.1 90.1 91.3 89.5 89.5 89.6 90.0 89.6 99.9 68.9 68.7 65.9 65.5
5 UPTC 99 93.0 93.0 93.3 93.3   98.6 98.6 99.6 99.0 92.4 94.5 91.0 91.0 91.0 91.1 90.9 92.9 69.2 69.0 66.2 65.3
6 UPTC NCTC12892 93.0 93.0 93.3 93.3 99.1   99.4 98.1 97.5 92.1 94.0 90.9 90.9 90.9 91.0 90.8 92.5 68.9 68.7 65.7 65.4
7 UPTC NCTC12893 92.7 92.7 93.0 93.0 98.8 99.1   98.1 97.7 92.1 94.1 90.9 90.9 90.9 91.0 90.8 92.4 69.1 68.9 65.9 65.3
8 UPTC NCTC12894 92.4 92.4 92.7 92.7 99.4 98.5 98.2   98.6 92.1 94.4 90.7 90.7 90.7 90.8 90.6 92.6 69.1 68.8 66.1 65.3
9 UPTC NCTC12895 91.8 91.8 92.1 92.1 98.8 97.9 98.2 98.2   91.4 93.6 90.0 90.0 90.4 90.3 89.9 91.9 68.9 68.7 65.9 64.9
10 UPTC NCTC12896 90.9 90.9 91.2 91.2 95.4 94.8 94.5 95.4 94.2   91.9 98.0 98.0 98.4 98.3 98.5 90.1 68.3 68.2 66.3 65.0
11 UPTC CF89-12 91.8 91.8 92.1 92.1 95.4 94.8 94.5 95.4 94.5 93.3   91.3 91.3 91.2 91.4 91.2 91.2 69.2 69.1 66.3 65.6
12 UPTC A1 91.2 91.2 91.5 91.5 94.5 94.2 93.9 94.5 93.3 97.9 93.6   100.0 99.0 99.3 99.3 89.5 68.5 68.4 66.0 64.8
13 UPTC A2 91.2 91.2 91.5 91.5 94.5 94.2 93.9 94.5 93.3 97.9 93.6 100.0   99.0 99.3 99.3 89.5 68.5 68.4 65.8 64.8
14 UPTC A3 91.5 91.5 91.8 91.8 94.8 94.5 94.2 94.8 93.6 98.8 93.9 99.1 99.1   99.5 99.5 89.6 68.3 68.2 66.4 65.0
15 UPTC 89049 91.8 91.8 92.1 92.1 95.1 94.8 94.5 95.1 93.9 98.5 94.2 99.4 99.4 99.7   99.4 90.0 68.5 68.4 66.4 64.7
16 UPTC 92251 91.5 91.5 91.8 91.8 94.5 94.2 93.9 94.5 93.2 98.5 93.9 98.8 98.8 99.7 99.4   89.6 68.3 68.2 66.2 64.7
17 C. lari RM2100 99.1 99.7 100.0 100.0 93.0 93.3 93.0 92.7 92.1 91.5 91.8 91.2 91.2 91.5 91.8 91.5   68.9 68.7 65.9 65.6
18 C. jejuni NCTC11168 57.0 57.3 57.6 57.6 57.6 57.6 57.3 57.9 57.3 56.7 57.7 57.1 57.1 56.8 56.8 56.5 57.1   99.8 82.8 74.7
19 C. jejuni RM1221 56.4 56.7 57.0 57.0 57.3 57.0 56.7 57.6 57.0 56.7 57.4 57.1 57.1 56.8 56.8 56.5 56.5 99.4   82.6 74.5
20 C. coli RM2228 55.5 55.5 55.8 55.8 55.2 55.8 55.5 55.2 54.9 55.3 55.3 55.5 55.5 55.8 55.8 55.5 55.3 81.3 81.0   71.0
21 C. upsaliensis RM3195 53.6 54.0 54.2 54.2 54.0 53.6 53.6 54.2 53.6 53.6 54.9 53.5 53.5 53.8 53.8 53.8 54.1 74.1 73.8 68.6