Table 3 LAMP primers used
GenBank accession no. | Primer | Sequence (5' to 3') | Gene location (bp) |
|---|---|---|---|
K02679 | CtxA-FIP | TCT GTC CTC TTG GCA TAA GAC GCA GAT TCT AGA CCT CCT G (F1c-F2) | 277-257 (F1c), 217–235(F2) |
CtxA-BIP | TCA ACC TTT ATG ATC ATG CAA GAG GCT CAA ACT AAT TGA GGT GGA A (B1-B2c) | 311–335(B1), 395-375(B2c) | |
CtxA-F3 | GCA AAT GAT GAT AAG TTA TAT CGG (F3) | 193–216 | |
CtxA-B3 | GMC CAG ACA ATA TAG TTT GAC C (B3c) | 433-412 | |
CtxA-LF | CAC CTG ACT GCT TTA TTT CA (LFc) | 256-237 | |
CtxA-LB | AAC TCA GAC GGG ATT TGT TAG G (LB) | 336–357 |