From: Identification of new genes in Sinorhizobium melilotiusing the Genome Sequencer FLX system
Gene | Replicon* | Predicted start | Predicted end | Strand | Length | Co-transcribed with upstream gene | Co-transcribed with downstream gene | Target description for predicted genes | E-value | Percent similarity |
---|---|---|---|---|---|---|---|---|---|---|
VBISMa0080 | A | 65258 | 65494 | - | 237 | SMa0121 | - | - | - | - |
VBISMa0492 | A | 410418 | 410660 | + | 243 | - | - | - | - | - |
VBISMa1337 | A | 1191271 | 1191525 | - | 255 | - | - | putative dioxygenase, slightly similar to catechol 1,2-dioxygenase protein [S. meliloti 1021] | 2e-4 | 25 |
VBISMb0078 | B | 66440 | 66619 | + | 180 | - | SMb20056 | hypothetical protein BMEII0534 [B. melitensis 16M] | 4e-3 | 30 |
VBISMb0839 | B | 679069 | 679800 | + | 732 | - | - | two component transcriptional regulator, LuxR family [S. medicae WSM419] | 2e-68 | 69 |
VBISMc0095 | C | 83906 | 84025 | + | 120 | tRNA-Ala | 23s rRNA | - | - | - |
VBISMc0802 | C | 662922 | 663287 | + | 366 | - | - | - | - | - |
VBISMc1000 | C | 815598 | 816023 | + | 426 | - | - | hypothetical protein Smed_0338 [S. medicae WSM419] | 6e-20 | 36 |
VBISMc1221 | C | 997383 | 997565 | + | 183 | ctaE | SMc00014 | hypothetical protein Smed_0524 [S. medicae WSM419] | 1e-15 | 63 |
VBISMc1492 | C | 1208848 | 1209090 | - | 243 | - | - | - | - | - |
VBISMc1793 | C | 1444596 | 1444832 | - | 237 | - | rne | - | - | - |
VBISMc2171 | C | 1725819 | 1726607 | - | 789 | - | SMc01204 | hypothetical protein Smed_1270 [S. medicae WSM419] | 8e-124 | 89 |
VBISMc2174 | C | 1728081 | 1728221 | - | 141 | SMc01200 | SMc01202 | - | - | - |
VBISMc2596 | C | 2060940 | 2061143 | + | 204 | - | csp4 | - | - | - |
VBISMc2940 | C | 2312866 | 2313225 | - | 360 | - | - | conserved hypothetical signal peptide protein [S. medicae WSM419] | 2e-54 | 89 |
VBISMc2955 | C | 2321074 | 2321289 | + | 216 | - | - | - | - | - |
VBISMc3188 | C | 2520862 | 2520993 | - | 132 | - | - | - | - | - |
VBISMc3282 | C | 2595016 | 2595537 | + | 522 | - | SMc01535 | Nodulation protein nolR | 9e-50 | 59 |
VBISMc4046 | C | 3233965 | 3234153 | + | 189 | SMc03108 | - | hypothetical protein pRL110117 [R. leguminosarum bv. viciae 3841] | 1e-5 | 56 |
VBISMc4289 | C | 3417257 | 3419215 | - | 1959 | - | - | hypothetical protein Cvib_0070 [P. vibrioformis DSM 265] | 4e-35 | 47 |