|
Genus species
|
Number seq
|
%
|
Gram
|
Aerotolerance
|
Shape
|
|---|
|
Pseudomonas sp*.
|
45
|
23.20
|
-
|
aerobic
|
rod
|
|
Pseudomonas aeruginosa.*
|
30
|
15.46
|
-
|
aerobic
|
rod
|
|
Pseudomonas fluorescens*
|
20
|
10.31
|
-
|
aerobic
|
rod
|
|
Enterobacter spp.
|
19
|
9.79
|
-
|
facultative
|
rod
|
|
Stenotrophomonas maltophilia.
|
14
|
7.22
|
-
|
aerobic
|
rod
|
|
Enterobacter cloacae
|
10
|
5.15
|
-
|
facultative
|
rod
|
|
Staphylococcus aureus*
|
7
|
3.61
|
+
|
Facultative anaerobe
|
cocci
|
|
Proteus vulgaris
|
6
|
3.09
|
-
|
Facultative anaerobe
|
rod
|
|
Shewanella algae
|
6
|
3.09
|
-
|
Facultative anaerobe
|
rod
|
|
Proteus mirabilis.
|
6
|
3.09
|
-
|
Facultative anaerobe
|
rod
|
|
UWB
|
4
|
2.06
|
unk
|
unk
|
unk
|
|
Clostridium perfringens
|
4
|
2.06
|
+
|
anaerobic
|
rod
|
|
Klebsiella spp.*
|
4
|
2.06
|
-
|
facultative
|
rod
|
|
Serratia marcescens *
|
3
|
1.55
|
-
|
aerobic
|
rod
|
|
Clostridium spp.
|
2
|
1.03
|
+
|
anaerobic
|
rod
|
|
Helcococcus kunzii
|
2
|
1.03
|
+
|
facultative anaerobe
|
cocci
|
|
Staphylococcus spp.*
|
2
|
1.03
|
+
|
Facultative anaerobe
|
cocci
|
|
Enterobacter aerogenes
|
2
|
1.03
|
-
|
Facultative anaerobe
|
rod
|
|
Bacillus fusiformis.
|
1
|
0.52
|
+
|
aerobic
|
rod
|
|
Enterococcus avium*
|
1
|
0.52
|
+
|
Facultative anaerobe
|
cocci
|
|
Enterococcus faecalis*
|
1
|
0.52
|
+
|
Facultative anaerobe
|
cocci
|
|
Peptococcus spp.
|
1
|
0.52
|
+
|
anaerobic
|
cocci
|
|
Achromobacter xylosoxidans
|
1
|
0.52
|
-
|
aerobic
|
rod
|
|
Salmonella spp.
|
1
|
0.52
|
-
|
Facultative anaerobe
|
rod
|
|
Escherichia coli
|
1
|
0.52
|
-
|
Facultative anaerobe
|
rod
|
|
Shigella spp.
|
1
|
0.52
|
-
|
Facultative anaerobe
|
rod
|
- This table provides the identified genera of the bacteria found using shotgun Sanger sequencing (FRACS) in the V sample, the number of sequences corresponding to this genus, the known gram staining properties, the aerotolerance (anaerobic, anaerobic, or facultative anaerobic) nature of the genus, and the shape of the genus. UWB refers to unknown wound bacteria or sequences without significant similarity to database sequences. The asterisk * identifies bacteria previously cultured from a single culture result from each subject's medical record from subjects in the V pool. Bacteria that were cultured and were not found using FRACSS include Acinetobacter, Citrobacter, and Corynebacterium. The % represents the percentage of the total sequences analyzed within the sample.
