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Table 1 Oligonucleotides used in the qRT-PCR reactions

From: Proinflammatory effect in whole blood by free soluble bacterial components released from planktonic and biofilm cells

mRNA target

Oligonucleotide (F: forward; R: reverse)

Final concentration (nM)

Amplicon length (bp)

Source

β-actin

F: 5'-GGATGCAGAAGGAGATCACTG-3'

300

90

[74]

 

R: 5'-CGATCCACACGGAGTACTTG-3'

300

  

IL-1β

F: 5'-ACAGATGAAGTGCTCCTTCCA-3'

300

73

[74]

 

R: 5'-GTCGGAGATTCGTAGCTGGAT-3'

300

  

IL-6

F: 5'-ACAGCCACTCACCTCTTCAG-3'

300

120

This work

 

R: 5'-GTGCCTCTTTGCTGCTTTCAC-3'

300

  

IL-8

F: 5'-GAACTGAGAGTGATTGAGAGTGGA-3'

900

134

[75]

 

R: 5'-CTCTTCAAAAACTTCTCCACAACC-3'

300

  

MIP-1β

F: 5'-CCAAACCAAAAGAAGCAAGC-3'

900

311

[76]

 

R: 5'-AGAAACAGTGACAGTGGACC-3'

300

  

TNF-α

F: 5'-CCCAGGGACCTCTCTCTAATC-3'

300

84

[74]

 

R: 5'-ATGGGCTACAGGCTTGTCACT-3'

300

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