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Table 4 Identities of variable region V6-V8 DGGE bands picked and sequenced from the gel in Figure 6A

From: A short-oligonucleotide microarray that allows improved detection of gastrointestinal tract microbial communities

DGGE band number Closest relative (if known) Origin and accession number Sequence homology (%)
1 Akkermansia muciniphila Adult human gut [GenBank:AY271254] 97
2 Uncultured human gut bacterial clone Elderly human [GenBank:AY920038] 100
3 Uncultured human gut bacterium Human gut [GenBank:EF402349] 99
4 Roseburia faecalis Healthy adult faecal sample [GenBank:DQ144129] 99
5 Uncultured human gut bacterial clone Human adult faecal sample [GenBank:DQ795140] 98
6 Uncultured bacterial clone Rumen [GenBank:DQ394592] 96
7 Uncultured Clostridiales clone Human gut [GenBank:EU530233] 99
8 Lachnobacterium bovis Animal rumen [GenBank:AF298665] 100
9 Lachnospira pectinoschiza Greenland ice core [GenBank:AY169414] 98
10 Butyrivibrio crossotus No origin given [GenBank:X89981] 98
11 Uncultured bacterial clone Human adult faecal sample [GenBank:AY916377] 99
12 Eubacterium rectale Healthy human gut [GenBank:AY804151] 99
13 Uncultured bacterial clone Porcine intestine [GenBank:AF371769] 100
14 Uncultured bacterial clone Human Crohn's disease patient [GenBank:AF530350] 99
15 Bifidobacterium longum NCC2705 Human intestinal tract [GenBank:AE014295] 100
16 Uncultured bacterial clone Animal rumen [GenBank:DQ394592] 97
17 Uncultured bacterial clone Human gut [GenBank:AF132248] 94
18 Eubacterium rectale Healthy human gut [GenBank:AY804151] 99
19 Uncultured bacterial clone Crohn's disease patient [GenBank:AF530350] 97
20 Uncultured bacterial clone Elderly human [GenBank:AY920002] 99