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Table 2 Summary of consistent amino acid change among the five DENV-2 genotypes viruses.

From: Specific genetic markers for detecting subtypes of dengue virus serotype-2 in isolates from the states of Oaxaca and Veracruz, Mexico

PROTEIN     AMINO ACID POSITIONSa
C and PrM     101 104 106 108 112 129 130 142 143 145 153
PrM          14 15 28 29 31 39
STRAIN/YEAR ACCESSION GENBANK No. DIAGNOSIS GENOTYPE            
Tonga/74 AY744147 DF AMERICAN T M I L V S R K D T M
S1vaccine/USA/93 M19197 DF AMERICAN T M I L V S R K D T M
131/MEX/92 AF100469 DF AMERICAN T M I L V S R K D T M
I348600/COL/86 AY702040 DF AMERICAN T M I L V S R K D T M
P23085 INDI-60/01 DQ448238 DF AMERICAN T M I L V S R K D T M
Ven2/87 AF100465 DF AMERICAN T M I L V S R K D T L
HUAT2/MEX/01 AY692469 DF ASIAN/AMERICAN T V I L A G R K V V L
SALC9/MEX/01 AY692465 DF ASIAN/AMERICAN T V I L A G R K D V I
HUAT11/MEX/01 AY692470 DHF ASIAN/AMERICAN T V I L A G R K D V I
HUAT12/MEX/01 AY692471 DF ASIAN/AMERICAN T V I L A G R E D V I
TUX19/MEX/01 AY692467 DHF ASIAN/AMERICAN T V I L A G R E D V I
TON4/MEX/01 AY692468 DHF ASIAN/AMERICAN T V I L A G R E D V I
JUCH5/MEX/01 AY692466 DHF ASIAN/AMERICAN T V I L A G R E D V I
OAX/MEXS707/05* EF595822 DF ASIAN/AMERICAN T V V L A G R E D V M
OAX/MEXS1038/05* EF595828 DF ASIAN/AMERICAN T V V L A G R E D V I
OAXS1656/MEX/05* EF595834 DF ASIAN/AMERICAN T V V L A G R E D V I
OAX/MEXS739/05* EF595829 DF ASIAN/AMERICAN T V V L A G R E D V I
OAX/MEXS1733/06* EF595821 DF ASIAN/AMERICAN T V V L A G R E D V I
OAX/MEXS14946/06* EF595800 DHF ASIAN/AMERICAN T V V L A G R E D V I
OAX/MEXS14760/06* EF595824 DHF ASIAN/AMERICAN T V V L A G R E D V I
OAX/MEXS1020/06* EF595823 DHF ASIAN/AMERICAN T V V L A G R E D V I
VER/MEXS013A/06* EU552535 DHF ASIAN/AMERICAN T V V L A G R E D V I
VER/MEXS011A/06* EU552536 DHF ASIAN/AMERICAN T V V L A G R E D V I
VER/MEXS008A/06* EU552538 DHF ASIAN/AMERICAN T V V L A G R E D V I
VER/MEXS015A/06* EU552534 DF ASIAN/AMERICAN T V V L A G R E D V I
VER/MEXS033A/06* EU552537 DF ASIAN/AMERICAN T V V L A G R E D V I
VER/MEXS020A/O6* EU552539 DF ASIAN/AMERICAN T V V L A G R E D V I
Cuba13/97 AY702034 DF ASIAN/AMERICAN T V V L A G R E D V I
Cuba115/97 AY702036 DF ASIAN/AMERICAN T V V L A G R E D V I
Cuba205/97 AY702039 DSS ASIAN/AMERICAN T V V L A G R E D V I
Cuba165/97 AY702038 DHF ASIAN/AMERICAN T V V L A G R E D V I
Cuba58/97 AY702035 DF ASIAN/AMERICAN T V V L A G R E D V I
Cuba89/97 AY702037 DHF/DSS ASIAN/AMERICAN T V V L A G R E D V I
MART/98-703/98 AF208496 DF ASIAN/AMERICAN T V V L A G R E D V I
DR23/01 AB122020 DF ASIAN/AMERICAN T V V L A G R E D V I
DR31/01 AB122021 DF ASIAN/AMERICAN T V V L A G R E D V I
DR59/01 AB122022 DHF ASIAN/AMERICAN T V V L A G R E D V I
LARD1701/Ven/01 AF360861 DF ASIAN/AMERICAN T V V L A G R E D V I
LARD1432/Ven/01 AF360860 DF ASIAN/AMERICAN T V V L A G R E D V I
LARD1910/Ven/01 AF360862 DF ASIAN/AMERICAN T V I L A G R E D V I
LARD1996/Ven/01 AF360863 DF ASIAN/AMERICAN T V I L A G R E D V I
Mara3/Ven/02 AY0444421 DHF ASIAN/AMERICAN T V I L A G R E D V I
BR64022/02 AF489932 NA ASIAN/AMERICAN T V I L A G R E D V I
Jamaica/1409/83 M20558 DHF ASIAN/AMERICAN T V I L A G R E D V I
China 04 U87411 DHF ASIAN/AMERICAN T V I L A G R E D V I
CO390/Th/99 AF100462 DHF ASIAN 1 S V I L V S R E D V M
Bangkok 1974 AJ487271 NA ASIAN 1 S M I L V S R E D V M
16681/USA/97 U87411 NA ASIAN 1 S M I L V S R E V V M
PDK53/USA/97 U87412 NA ASIAN 1 S M I L V S R E V V M
16681-PDK53/97 U87411 DHF ASIAN 1 S M I L V S R E D V M
ThNH-p11/93 AF022437 DF ASIAN 1 S M I L V S R E D V M
ThNH-p12/93 AF022438 DF ASIAN 1 S M I L V S R E D V M
ThNH-p14/93 AF022439 DHF ASIAN 1 S M I L V S R E D V M
ThNH-7/93 AF022434 DSS ASIAN 1 S M I L V S I E D V M
ThNH-28/93 AF022435 DHF ASIAN 1 S M I L V S I E D V M
ThNH-52/93 AF022436 DHF ASIAN 1 S M I L V S I E D V M
ThNH-p16/93 AF022440 DF ASIAN 1 S M I L V S I E D V M
ThNH-p36/93 AF022441 DHF ASIAN 1 S M I L V S I E D V M
ThNH29/93 AF169678 DHF ASIAN 1 S M I L V S I E D V M
ThNH36/93 AF169679 DF ASIAN 1 S M I L V S I E D V M
ThNH45/93 AF169680 DHF ASIAN 1 S M I L V S I E D V M
ThNH55/93 AF169681 DHF ASIAN 1 S M I L V S I E D V M
ThNH54/93 AF169682 DHF ASIAN 1 S M I L V S I E D V M
ThNH62/93 AF169683 DHF ASIAN 1 S M I L V S I E D V M
ThNH63/93 AF169684 DHF ASIAN 1 S M I L V S I E D V M
ThNH69/93 AF169685 DHF ASIAN 1 S M I L V S I E D V M
ThNH73/93 AF169686 DHF ASIAN 1 S M I L V S I E D V M
ThNH76/93 AF169687 DHF ASIAN 1 S M I L V S I E D V M
ThNH81/93 AF169688 DHF ASIAN 1 S M I L V S I E D V M
Mara 4/Ven/90& AF100466 DHF ASIAN 1 S M I L V S I E D V M
K0008/Th/99 AF100459 DHF ASIAN 1 S M I L V S I E D V M
K0010/Th/99 AF100460 DF ASIAN 1 S M I L V S I E D V M
C0371/Th/99 AF100461 DF ASIAN 1 S M I L V S I E D V M
C0166/Th/99 AF100463 DF ASIAN 1 S M I L V S I E D V M
C0167/Th/99 AF100464 DHF ASIAN 1 S M I L V S I E D V M
New Guinea C/44 D00346 DHF ASIAN 2 T M I L V S R E D V M
43/China/89 AF204178 DF ASIAN 2 T M I L V S R G D V M
44/China/87 AF204177 DF ASIAN 2 T M I L V S R G D V M
BA05i/Indon/05 AY858035 DF COSMOPOLITAN T I I M V S R E N V M
TSV01/Austra/93 AY037116 NA COSMOPOLITAN T I I M V S R E N V M
98900666/Indo/04 AB189124 DSS COSMOPOLITAN T V I M V S R E N V M
ZS01/China/01 EF051521 NA COSMOPOLITAN T V I M V S R E N V M
GWL18/INDI/01 DQ448231 NA COSMOPOLITAN T V I L A S R E D V M
GWL39/INDI/01 DQ448232 NA COSMOPOLITAN T V I L A S R E D V M
  1. aAmino acid sequence was numbered starting from protein C or prM to the end of the last codon sequenced. *Sequences of this study.
  2. &Recombinant strain [16].