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Table 4 Bacterial strains and plasmids

From: Characterization of a restriction modification system from the commensal Escherichia coli strain A0 34/86 (O83:K24:H31)

E. colistrains

Relevant characteristics

Reference

C122

prototroph, Δhsd

British Culture Collection Strain No. 122

BL21(DE3)

F- dcm, ompT hsdS (rB- mB-) gal λ (DE3)

[34]

DH10B

F- – mcrA Δ (mrr-hsdRMS-mcrBC) phi 80lacZ DM15 Δ lacX74 recA1 endA1 ara D139 Δ(ara, leu)7697 galU galK rpsL nupG

Invitrogen

A0 34/86

serotype O83: K24: H31

[9, 10]

DB24

dcm-6 dam-16::Kan mcr-62 Δ(mcrB-hsd-mrr)114

[33]

Plasmids

  

BAC

pBeloBAC11 cloning vector: ori2 (IncFI), designed for the construction of Bacterial Artificial Chromosomes (BACs), Cm R

[35]

BAC C4/1

about 56 kb insert from strain E. coli A0 34/86 (O83: K24: H31) into pBeloBAC11

[11]

pL series

series of pMECA plasmids containing lambda DNA fragments, ApR

[22]

pE series

E. coli K-12 chromosomal fragments subcloned into the pUC9 vector, ApR

[32]

pEco377I

pMECA plasmid with pEco377I recognition sequence at EcoRV site

[22]

pUC19

cloning vector, ApR

[36]

pGC1

hsdR, hsdM and hsdS genes of the EcoEI R-M system, ApR

[5]

pFFP30

hsd region of EcoAI on HindIII fragment cloned into pBR322, ApR

[5]

pJP24

HincII/NotI fragment from pJP21 carrying the hsdS of the EcoAI R-M system cloned into NdeI/NotI pET32a under control of the P T7g10 promoter. ApR

[37]

pJP21

A derivative of pFFP30 and pET32a carrying the hsdM and hsdS genes of the EcoAI R-M system under control of the P T7g10 promoter. ApR

[37]