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Table 1 Taxonomic distribution of the in-silico inferred toxins identified for the 5 TAQ runs.

From: Automated discovery and phylogenetic analysis of new toxin-antitoxin systems

Query sequences In silico inferred toxins Total in silico inferred toxins Bad Poisons Without antinodes poisons
  Bacteria Archaea Viruses Artificial & Plasmids    
ParE 665 38 0 7 710 102 387
MazF 205 14 1 7 216 88 196
Doc 83 1 2 0 86 59 43
CcdB 20 0 0 2 22 67 85
VapC 717 143 0 0 860 121 87
  1. Values represent the number of sequences in each category. The " in silico inferred toxins" are sequences that meet all the constraints implemented in TAQ whereas the "bad poisons" do not match the length constraints and the "without antidote poisons" meet the size constraints but do not exhibit an ORF of constrained size and position (see text for details). "Artificial" sequences are engineered sequences such as cloning vectors.