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Table 4 B. pseudomallei and B. mallei isolates

From: Tandem repeat regions within the Burkholderia pseudomallei genome and their application for high resolution genotyping

Species

Strain Name

Other Identifier

Country of Origin

Source

Site

Date

Tree Code

B. pseudomallei (66)

PHLS 5*

2002721617, NCTC 8016

Australia

Sheep

 

1949

Bp_Aust_Sheep_49

 

PHLS 91

2002721622, 84–1097

Australia

Sheep

Lung

1984

Bp_Aust_Sheep_84

 

PHLS 92

2002721623, 85–1097

Australia

Cow

Spleen

1985

Bp_AustCow_85

 

PHLS 83

 

Australia

Environment

Soil

 

Bp_Aust1_Env

 

PHLS 84*

 

Australia

Environment

Soil

 

Bp_Aust2_Env

 

PHLS 85

 

Australia

Environment

Soil

 

Bp_Aust3_Env

 

PHLS 104

 

Australia

Goat

Lymph node

 

Bp_Aust_Goat

 

146*

 

Australia

Animal

Right Udder

1992

Bp_Aust_NT_Animal_1_92

 

147

 

Australia

Animal

Med Lymph Node

1992

Bp_Aust_NT_Animal_2_92

 

213

 

Australia

Environmental

Soil

1993

Bp_Aust_NT_Envl_93

 

214

 

Australia

Environmental

Soil

1993

Bp_Aust_NT_Env2_93

 

465a

 

Australia

Human

Blood

1997

Bp_Aust_NT_Human_1_97

 

465e

 

Australia

Human

Sputum

1997

Bp_Aust_NT_Human_2_97

 

1459

 

Australia

Human

Sputum

2002

Bp_Aust_NT_Human_02

 

1627

 

Australia

Human

Sputum

2003

Bp_Aust_NT_Human_1_03

 

1628

 

Australia

Human

Throat

2003

Bp_Aust_NT_Human_2_03

 

PHLS 6

 

Bangledesh

Human

 

1960

Bp_Bangledesh_Human_60

 

PHLS 208

 

Ecuador

Human

  

Bp_Equador_Human

 

PHLS 68

 

Fiji

Human

Blood

1992

Bp_Fiji_Human_92

 

PHLS 33

2002721630, 7605

France

Environment

Manure

1976

Bp_France_Env_76

 

PHLS 24

2002721620, 7641

France

Horse

Stool

1976

Bp_France_Horse_76

 

PHLS 4075

 

Holland (tourist)

Human

Sputum

1999

Bp_tourist_2_99

 

PHLS 4152

 

Holland (tourist)

Human

Cervix

1999

Bp_tourist_3_99

 

PHLS 17

 

Indonesia

Monkey

Spleen

1990

Bp_Indo1_Monkey_90

 

PHLS 18*

 

Indonesia

Monkey

Pus

1990

Bp_Indo2_Monkey_90

 

PHLS 3477

 

Italy (Tourist SE Asia)

Human

Sputum

1998

Bp_Tourist1_98

 

PHLS 31*

 

Kenya

Environment

Water drain

1992

Bp_Kenya_Env_92

 

PHLS 25*

 

Madagascar

Environment

Soil

1977

Bp_Madagascar_Env_77

 

PHLS 71

 

Malaysia

Human

  

Bp_Malaysia1_Human

 

PHLS 72*

 

Malaysia

Human

  

Bp_Malaysia2_Human

 

PHLS 73

 

Malaysia

Human

  

Bp_Malaysia3_Human

 

PHLS 79

 

Malaysia

Human

  

Bp_Malaysia4_Human

 

PHLS 75*

 

Malaysia

Human

  

Bp_Malaysia5_Human

 

PHLS 9

2002721637, 521

Pakistan

Human

 

1988

Bp_Pakistan_Human_88

 

PHLS 16

 

Phillipines

Monkey

 

1990

Bp_Phillipines1_Monkey_90

 

PHLS 14

 

Phillipines

Monkey

Liver

1990

Bp_Phillipines2_Monkey_90

 

PHLS 39*

 

Singapore

Human

Blood

1988

Bp_Sing1_Human_88

 

PHLS 36

2002721635

Singapore

Human

 

1988

Bp_Sing2_Human_88

 

PHLS 38

 

Singapore

Human

 

1988

Bp_Sing3_Human_88

 

PHLS 40

 

Singapore

Human

 

1988

Bp_Sing4_Human_88

 

PHLS 19

 

Singapore

Environment

 

1991

Bp_Sing_Env_91

 

PHLS 3584

 

Sweden (Tourist SE Asia)

Human

Blood

1998

Bp_Tourist2_98

 

PHLS 8*

 

Thailand

Human

 

1988

Bp_Thai_Human_88

 

PHLS 20

 

Thailand

Human

Blood

1990

Bp_Thai_Human_90

 

PHLS 53

2002721633, 307a

Thailand

Human

Urine

1987

Bp_Thail_NE_Human_87

 

PHLS 43

 

Thailand

Human

 

1988

Bp_Thai1_NE_Human_88

 

PHLS 45

 

Thailand

Human

 

1988

Bp_Thai2_NE_Human_88

 

PHLS 47

 

Thailand

Human

 

1988

Bp_Thai4_NE_Human_88

 

PHLS 44*

 

Thailand

Human

 

1988

Bp_Thai5_NE_Human_88

 

PHLS 392

 

Thailand

Human

 

1989

Bp_Thai_NE_Human_89

 

PHLS 216

2002721626

Thailand

Environment

 

1990

Bp_Thai_NE_Env_90

 

PHLS 110

 

Thailand

Human

Urine

1992

Bp_Thai1_NE_Human_92

 

PHLS 111

 

Thailand

Human

Blood

1992

Bp_Thai2_NE_Human_92

 

PHLS 112*

 

Thailand

Human

 

1992

Bp_Thai3_NE_Human_92

 

PHLS 98/SID 2953*

 

United Kingdom

Human

 

1998

Bp_UK_Human1_98

 

PHLS 98/SID 3292*

 

United Kingdom

Human

 

1998

Bp_UK_Human2_98

 

99/SID 4349

 

United Kingdom

Human

 

1999

Bp_UK_Human_99

 

PHLS 2889

 

United Kingdom (Bangledesh national)

Human

Sputum

1998

Bp_Bangledesh_National_human_98

 

PHLS 3811

 

United Kingdom (Bangledesh national)

Human

Abscess

1999

Bp_Bangledesh_National_1_human_99

 

PHLS 3871

 

United Kingdom (Bangledesh national)

Human

Abscess

1999

Bp_Bangledesh_National_2_human_99

 

PHLS 3783*

 

United Kingdom (Tourist SE Asia)

Human

Sputum

1999

Bp_Tourist1_99

 

PHLS 35

2002721638, Ducrete

Vietnam

Human

 

1963

Bp_Vietnam_Human_63

 

PHLS 126

     

Bp1

 

ACTC 11668

     

Bp2

 

ACTC 15682

     

Bm_Hungary1_61

 

ACTC 23343

  

Type strain

  

Bp_TypeStrain

B. mallei (21)

ACTC 10399*

2002721275, GB11, NCTC 10245

China

Horse

Lung

1956

Bm_China_Horse_56

 

ACTC 15310

 

Hungary

  

1961

Bp3

 

NCTC 10229

GB5

Hungary

  

1961

Bm_Hungary2_61

 

NCTC 3708

GB9

India

Mule

Lung

1932

Bm_India_Mule_32

 

NCTC 3709

GB10

India

Horse

 

1932

Bm_India_Horse_32

 

NCTC 10260

GB6

Turkey

Human

 

1949

Bm_Turkey_Human_49

 

NCTC 10248

GB4

Turkey

Human

 

1950

Bm_Turkey_Human_50

 

NCTC 10247

GB7

Turkey

  

1960

Bm_Turkey_60

 

NCTC 120

GB3

United Kingdom

  

1920

Bm_UK_1920

 

85_503

  

Equine

  

Bm_equine

 

86_567

 

East India

Mule

  

Bm1

 

ISU

     

Bm2

 

Turkey_1

 

Turkey

   

Bm_Turkey1

 

Turkey_2

 

Turkey

   

Bm_Turkey2

 

Turkey_3

 

Turkey

   

Bm_Turkey3

 

Turkey_4

 

Turkey

   

Bm_Turkey4

 

Turkey_5

 

Turkey

   

Bm_Turkey5

 

Turkey_6

 

Turkey

   

Bm_Turkey6

 

Turkey_7

 

Turkey

   

Bm_Turkey7

 

Turkey_8

 

Turkey

   

Bm_Turkey8

 

Turkey_9

 

Turkey

   

Bm_Turkey9

  1. * Isolates used in the screening panel.