Acid up-regulated: log2 ratio
|
Base up-regulated: log2 ratio
|
---|
pH 5.7/7.0
|
pH 7.0/8.5
|
pH 5.7/8.5
|
pH 5.7/7.0
|
pH 7.0/8.5
|
pH 5.7/8.5
|
---|
gadA
|
4.89
|
tdcB
2
|
3.17
|
hycA
|
4.75
|
ompF
2
|
-3.71
|
gadA
|
-3.46
|
cpxP
2
|
-4.32
|
aidB
|
4.56
|
srlA
1
|
3.16
|
adiC
|
4.52
|
proV
2
|
-2.77
|
cpxP
2
|
-3.29
|
b3913
|
-4.07
|
yhiM
|
4.55
|
tdcD
|
3.15
|
hycE
|
3.70
|
yfdI
1
|
-2.72
|
b3913
2
|
-3.14
|
sdhC
1
|
-3.36
|
adiC
|
4.10
|
srlB
1
|
3.06
|
adiA
|
3.67
|
borD
2
|
-2.71
|
bdm
|
-2.98
|
mutL
2
|
-3.17
|
sufB
|
3.84
|
cadB
|
3.02
|
citE
|
3.60
|
sdaC
2
|
-2.57
|
rmf
2
|
-2.57
|
proV
2
|
-3.11
|
gadC
|
3.73
|
mdtJ
1
|
2.91
|
yagU
1
|
3.60
|
sdhD
1
|
-2.47
|
gadB
|
-2.50
|
borD
2
|
-2.94
|
adiA
|
3.67
|
srlD
1
|
2.87
|
citD
|
3.49
|
nmpC
2
|
-2.40
|
gadC
|
-2.44
|
yfdI
1
|
-2.66
|
sufC
|
3.61
|
srlE
1
|
2.86
|
hydN
|
3.41
|
b2974
|
-2.28
|
gadE
|
-2.23
|
yccA
2
|
-2.64
|
slp
|
3.47
|
lacA
|
2.53
|
yeiA
|
3.38
|
pppA
2
|
-2.10
|
rcsA
1
|
-2.23
|
ymgB
|
-2.62
|
cbpM
|
3.45
|
tdcC
|
2.50
|
gatD
1
|
3.29
| | |
ymgB
|
-2.19
|
ymgD
|
-2.49
|
gadB
|
3.21
|
gatD
1
|
2.45
|
gatC
1
|
3.12
| | |
ycfS
2
|
-2.17
|
rcsA
1
|
-2.43
|
narH
|
3.20
|
fimA
1
|
2.38
|
yeiT
|
3.12
| | |
yjbJ
|
-2.16
|
ycfS
2
|
-2.42
|
cbpA
|
3.19
|
hycA
|
2.30
|
cadB
|
3.08
| | |
osmB
2
|
-2.12
|
dctA
|
-2.41
|
gadE
|
3.19
|
cadA
1
|
2.28
|
adiY
|
3.06
| | |
glpD
|
-2.05
|
tgt
2
|
-2.39
|
mdtE
|
3.17
|
fimC
1
|
2.18
|
cadA
1
|
3.06
| | |
katE
|
-2.01
|
yeaC
1
|
-2.35
|
narG
|
3.12
|
ykgA
1
|
2.09
|
mdtJ
1
|
3.02
| | |
mutL
2
|
-1.99
|
yebE
2
|
-2.31
|
yegP
|
3.07
|
argO
1
|
2.08
|
aidB
|
3.01
| | | | |
htpX
2
|
-2.27
|
ybaS
|
2.88
|
tdcF
|
2.05
|
yhiM
|
2.89
| | | | |
malM
|
-2.24
|
cfa
1
|
2.83
|
nrfB
|
2.05
|
appC
|
2.88
| | | | |
mltD
|
-2.22
|
hyaF
|
2.82
|
ompF
2
|
2.04
|
appB
|
2.75
| | | | |
oppB
1
|
-2.19
|
ygeW
|
2.82
|
yagU
1
|
2.03
|
ygeW
|
2.73
| | | | |
aceA
|
-2.15
|
gadW
|
2.70
|
gatC
1
|
2.03
|
ykgA
1
|
2.68
| | | | |
bdm
|
-2.14
|
citE
|
2.69
| | |
nrfB
|
2.62
| | | | |
b1172
|
-2.07
|
gadX
|
2.66
| | |
hyaF
|
2.58
| | | | |
fdoG
1
|
-2.04
|
citD
|
2.65
| | |
yccD
|
2.55
| | | | |
ompT
1
|
-2.03
|
ybeL
|
2.65
| | |
gatA
1
|
2.46
| | | | | | |
fbaB
|
2.62
| | |
hycD
|
2.45
| | | | | | |
dctR
|
2.60
| | |
gatB
1
|
2.37
| | | | | | |
mdtF
|
2.58
| | |
appY
|
2.33
| | | | | | |
narJ
|
2.58
| | |
appA
|
2.32
| | | | | | |
sufA
|
2.55
| | |
gatR
|
2.32
| | | | | | |
yccJ
|
2.54
| | |
nemA
1
|
2.31
| | | | | | |
ybaT
|
2.49
| | |
yjdK
|
2.31
| | | | | | |
dps
1
|
2.47
| | |
cfa
|
2.27
| | | | | | |
hyaD
|
2.47
| | |
hyaD
|
2.27
| | | | | | |
hycA
|
2.45
| | |
hyaA
|
2.26
| | | | | | |
appB
|
2.44
| | |
cbpA
|
2.23
| | | | | | |
appC
|
2.44
| | |
uspD
1
|
2.23
| | | | | | |
yjbJ
|
2.42
| | |
lysC
1
|
2.20
| | | | | | |
hyaC
|
2.41
| | |
hycF
|
2.19
| | | | | | |
flgD
1
|
2.40
| | |
gatZ
|
2.16
| | | | | | |
wrbA
|
2.39
| | |
hyaC
|
2.16
| | | | | | |
adiY
|
2.37
| | |
hyaB
|
2.14
| | | | | | |
hyaE
|
2.36
| | |
hycB
|
2.11
| | | | | | |
yhcO
|
2.36
| | |
nrfA
|
2.06
| | | | | | |
sufD
|
2.35
| | |
srlD
1
|
2.06
| | | | | | |
hyaA
|
2.33
| | |
hyaE
|
2.02
| | | | | | |
hyaB
|
2.32
| | |
yiiS
1
|
2.02
| | | | | | |
uspB
|
2.32
| | | | | | | | | | |
yeiA
|
2.32
| | | | | | | | | | |
hdeD
|
2.30
| | | | | | | | | | |
yjbQ
1
|
2.30
| | | | | | | | | | |
yeiT
|
2.28
| | | | | | | | | | |
ivy
|
2.26
| | | | | | | | | | |
yhiD
|
2.26
| | | | | | | | | | |
yjjU
1
|
2.26
| | | | | | | | | | |
appA
|
2.24
| | | | | | | | | | |
yebV
|
2.24
| | | | | | | | | | |
ybhE
|
2.20
| | | | | | | | | | |
psiF
2
|
2.19
| | | | | | | | | | |
sra
1
|
2.13
| | | | | | | | | | |
hycE
|
2.10
| | | | | | | | | | |
yqjE
|
2.08
| | | | | | | | | | |
yehE
|
2.06
| | | | | | | | | | |
ydiH
1
|
2.03
| | | | | | | | | | |
yqjD
2
|
2.03
| | | | | | | | | | |
yjdI
|
2.02
| | | | | | | | | | |
hydN
|
2.01
| | | | | | | | | | |
yeaQ
1
|
2.01
| | | | | | | | | | |
- 1Acid-induced with aeration [2]
- 2Base-induced with aeration [2]