Table 1 EV-71 and HEV-A sequences used for sequence analysis and construction of phylogenetic trees.
Abbreviation | Strain | Accession number | Clinical presentation | Reference |
|---|---|---|---|---|
UH1 * | UH1/PM/1997 | EMBL: AM396587 | Fatal | 3 |
SHA89 * | EV71/9/97/SHA89 | EMBL: AJ586873 | Fatal | 21 |
SHA63 * | EV71/SAR/SHA63 | EMBL: AM396588 | HFMD | 3 |
SHA66 * | EV71/SAR/SHA66 | EMBL: AM396586 | HFMD | 3 |
SHA52 * | ENT/PM/SHA52 | EMBL: AM396584 | HFMD | 11 |
SHA71 * | ENT/PM/SHA71 | EMBL: AM396585 | HFMD | 11 |
5666 | 5666/sin/002209 | EMBL: AF352027 | HFMD | 45 |
5865 | 5865/sin/000009 | EMBL: AF316321 | Fatal | 45 |
BrCr | BrCr | Genbank: U22521 | Aseptic meningitis | 46 |
MS | MS/7423/87 | Genbank: U22522 | Aseptic meningitis | 46 |
TW2272 | TW/2272/98 | EMBL: AF119795 | Fatal | 47 |
TW2086 | TW/2086/98 | EMBL: AF119796 | HFMD | 47 |
NCKU9822 | NCKU9822 | EMBL: AF136379 | Fatal | 6 |
176044 | 1245a/98/tw | EMBL: AF176044 | HFMD | 48 |
Tainan5746 | Tainan/5746/98 | EMBL: AF304457 | HFMD | 49 |
Tainan4643 | Tainan/4643/98 | EMBL: AF304458 | Aseptic meningitis | 49 |
Tainan6092 | Tainan/6092/98 | EMBL: AF304459 | HFMD | 49 |
SHZH98 | SHZH98 | EMBL: AF302996 | HFMD | 50 |
SHZH03 | SHZH03 | EMBL: AY465356 | ? | 51 |
CV-A2 | CV-A2/Fleetwood | EMBL: AY421760 | Paralytic illness + | 18 |
CV-A3 | CV-A3/Olson | EMBL: AY421761 | Meningitis + | 18 |
CV-A4 | CV-A4/High Point | EMBL: AY421762 | Not known + | 18 |
CV-A5 | CV-A5/Swartz | EMBL: AY421763 | Poliomyelitis + | 18 |
CV-A6 | CV-A6/Gdula | EMBL: AY421764 | Meningitis + | 18 |
CV-A7 | CV-A7/Parker | EMBL: AY421765 | Bulbar poliomyelitis + | 18 |
CV-A8 | CV-A8/Donovan | EMBL: AY421766 | Sore throat, nuchal rigidity, muscle weakness + | 18 |
CV-A10 | CV-A10/Kowalik | EMBL: AY421767 | Meningitis + | 18 |
CV-A12 | CV-A12/Texas-12 | EMBL: AY421768 | Flies in polio community + | 18 |
CV-A14 | CV-A14/G-14 | EMBL: AY421769 | None + | 18 |
CV-A16/G10 | CV-A16/G-10 | Genbank: U05876 | HFMD | 52 |
Tainan5079 | Tainan/5079/98 | EMBL: AF177911 | HFMD | 49 |