From: Diversity in coding tandem repeats in related Neisseria spp.
Repeats | Strains | MC58 | 44/76 | NGE30 | BZ133 | 92001 | 94/155 | A22 | Z2491 | FAM18 | L18 | L12 | L22 | FA1090 | FA19 | 26034 | Repeat length | Nature * |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
TR1 | Â | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 30 bp / 10 aa | no new |
TR2 | Â | 3 | 4 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | np | 2 | 2 | 2 | 33 bp / 11 aa | more |
TR3 | Â | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | np | np | 2 | 2 | 2 | 18 bp / 6 aa | no new |
TR4 | Â | 3 | 2 | 3 | 3 | 3 | 3 | 3 | 4 | 3 | np | 1 | 1 | 2 | 2 | 1 | 87 bp / 29 aa | more |
TR5 †|  | 2 / 4 | 2 / 5 | 2 / 3 | 2 / 4 | 2 / 1 | 2 / 3 | 2 / 5 | 2 / 3 | 0 / 0‡ | np | np | np | 1 / 1 | 1 / 2 | 1 / 2 | †| more |
TR6 | Â | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 15 bp / 5 aa | no new |
TR7 | Â | 2 | 2 | 2 | 2 | 3 | 2 | 2 | 3 | 2 | 2 | 3 | 2 | 3 | 3 | 2 | 12 bp / 4 aa | no new |
TR8 | Â | 2 | 2 | 2 | 2 | 2 | 3 | 2 | 3 | 4 | 2 | 2 | 2 | 2 | 2 | 2 | 30 bp / 10 aa | more |
TR9 | Â | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 30 bp / 10 aa | species |
TR10 | Â | 3 | 3 | 2 | 3 | 3 | 3 | 3 | 2 | 3 | 2 | 0 | 2 | 1 | 1 | 1 | 207 bp / 69 aa | more |
TR11 | Â | 2 | 2 | 3 | 3 | 4 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 4 | 4 | 15 bp / 5 aa | more |
TR12 | Â | 1 | 1 | 1 | 3 | 3 | 1 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 21 bp / 7 aa | no new |
TR13 | Â | 2 | 2 | 7 | 2 | 2 | 3 | 2 | 2 | 4 | np | np | np | 3 | 3 | 3 | 21 bp / 7 aa | more |
TR14 | Â | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | np | np | np | 2 | 2 | 2 | 240 bp / 80 aa | species |
TR15 | Â | 14 | 14 | 15 | 15 | 10 | 14 | 15 | 14 | 13 | np | np | np | 12 | 18 | 16 | 15 bp / 5 aa | more |
TR16 | Â | 3 | 3 | 3 | 2 | 3 | 2 | np | 2 | 2 | 3 | 3 | 3 | 3 | 3 | 3 | 12 bp / 4 aa | no new |
TR17 | Â | 2 | np | 2 | 2 | 2 | np | 2 | 2 | 2 | np | np | np | 1 | np | 1 | 57 bp / 19 aa | species |
TR18 |  | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 2 | 2 | 2 | 2 | 12 bp / 4 aa | species§ |
TR19a | Â | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | np | np | np | 2 | 2 | 2 | 18 bp / 6 aa | species |
TR19b | Â | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 4 | 4 | 4 | 4 | 4 | 9 bp / 3 aa | species |
TR20 || | Â | 4 | 4 | 8 | 1 | 2 | 2 | 1 | 1 | 1 | 5 | 8 | 11 | 2 | 2 | nd | 108 bp / 36 aa | more |
TR21 | Â | 6 | 6 | 6 | 6 | 6 | 6 | 6 | 6 | 6 | np | np | np | 2 | 2 | 2 | 6 bp / 2 aa | species |
TR22 | Â | 7 | 11 | 19 | 5 | 6 | 9 | 16 | 9 | 26 | np | np | np | 2 | 2 | 2 | 9 bp / 3 aa | more |
TR24 | Â | 15 | 14 | 3 | np | np | 5 | 14 | --- | --- | np | np | np | --- | np | np | 18 bp / 6 aa | more |
TR26 |  | 2 | 2 | 2 | 2 | 2 | 1¶ | 2 | 2 | 2 | np | np | np | 2 | 2 | 2 | 273 bp / 91 aa | none |
TR27 | Â | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | np | np | np | 2 | 2 | 2 | 261 bp / 87 aa | none |
TR28 | Â | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 258 bp / 86 aa | none |
Repeats | Strains | FA1090 | MS11 | FA19 | F62 | 25534 | 28539 | 26034 | 26241 | 27921 | 29528 | 28516 | 27806 | Â | Â | Â | Â | Â |
TR23 | Â | 3 | 3 | 3 | 3 | 5 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | Â | Â | Â | 18 bp / 6 aa | more |
TR25 | Â | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | 3 | Â | Â | Â | 30 bp / 10 aa | none |