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Table 2 Proteins regulated with ≥0.6 log 2 change in isolate 00–2426 (no CJIE1) compared with isolate 00–2425 (with CJIE1, grown on MH) as reference when isolates were grown on MH and MH + SD

From: The CJIE1 prophage of Campylobacter jejuni affects protein expression in growth media with and without bile salts

Protein namea GI number Locus in NCTC 11168 Protein function or region log2change 00–2425 MH + SD agar log2change 00–2426 MH agar log2change 00–2426 MH + SD agar
CJIE1 00–2425 ORF 11 gi|313116388 Not present Unknown 0.67 ± 0.40 −2.43 ± 0.70 −2.13 ± 1.27
CJIE1 signal peptidase I associated with PanB gi|315124225 Not present Prophage repressor 0.50 ± 0.20 −3.75 ± 0.64 −3.15 ± 0.78
Hypothetical protein CJJ81176_0110 gi|121613178 Cj0073c Unknown 0.83 ± 0.21 0.87 ± 0.99 1.27 ± 0.67
Iron-sulfur cluster binding protein gi|121612415 Cj0074c Unknown 0.57 ± 0.6 0.63 ± 1.01 1.00 ± 0.61
Anaerobic C4-dicarboxylate transporter gi|218561769 Cj0088   1.03 ± 1.04 1.13 ± 0.40 2.17 ± 0.38
Hypothetical protein Cj0170 gi|218561850 Cj0170 Unknown −0.30 ± 0.10 −2.80 ± 0.90 −2.97 ± 0.31
Hypothetical protein CJJ81176_0447 gi|121613189 Cj0427 Unknown 0.33 ± 1.46 1.33 ± 1.12 1.07 ± 1.66
Invasion phenotype protein CipA gi|157414972 Cj0685c Sugar transferase 0.70 ± 0.20 −2.87 ± 0.21 −2.43 ± 0.47
Phosphate acetyltransferase Pta gi|121613717 Cj0688 Acetate metabolism, regulation −0.03 ± 0.21 −2.43 ± 0.31 −2.67 ± 0.58
Acetate kinase AckA gi|384443065 Cj0689 Acetate metabolism, regulation −0.33 ± 0.64 −3.37 ± 0.25 −2.70 ± 1.00
Oxidoreductase gi|218562461 Cj0833c Oxidoreductase −0.10 ± 0.10 −0.96 ± 1.76 −1.10 ± 0.95
Ankyrin repeat-containing periplasmic protein gi|218562462 Cj0834c Mediates protein-protein interactions −0.67 ± 0.25 −1.20 ± 2.42 −1.60 ± 1.05
Amino acid ABC transporter, ATP-binding protein PEB1 gi|121612723 Cj0922c Amino-acid ABC transporter 0.77 ± 0.21 0.63 ± 0.68 1.03 ± 0.45
Aspartate carbamoyltransferase catalytic subunit PyrB gi|218562712 Cj1098 Pyrimidine biosynthesis 0.20 ± 0.35 −1.70 ± 0.17 −1.57 ± 0.21
Oligoendopeptidase F PepF gi|218562713 Cj1099 Degradation of macromolecules −0.20 ± 0.10 −1.43 ± 0.32 −1.63 ± 0.23
ATP-dependent DNA helicase UvrD gi|384448349 Cj1101 DNA helicase 0.73 ± 0.42 −1.65 ± 0.21* −1.23 ± 0.47
Hypothetical protein ICDCCJ07001_1249 gi|315124755 Cj1305 Part of O-linked glycosylation locus −0.35 ± 0.35* 1.30 ± 1.56* 2.53 ± 2.60
Hypothetical protein Cj1310c gi|218562921 Cj1310c Part of O-linked glycosylation locus −0.23 ± 0.25 1.33 ± 1.02 0.87 ± 0.81
Motility accessory factor gi|407942710 Cj1318 Part of O-linked glycosylation locus 0.03 ± 0.32 0.93 ± 0.98 1.00 ± 0.17
Maf7; hypothetical protein C8J_1258 gi|157415578 Cj1342c Motility accessory factor 0.20 ± 0.10 1.57 ± 0.31 1.87 ± 0.31
Sugar transferase gi|218563025 Cj1421c Part of capsule locus 0.50 ± 0.17 0.80 ± 0.66 1.3 ± 0.60
Methyltransferase protein gi|218563030 Cj1426c Part of capsule locus 0.57 ± 0.72 1.13 ± 0.72 1.03 ± 0.65
Hypothetical protein Cj1429c gi|218563033 Cj1429c Capsule biosynthesis 0.33 ± 0.32 −2.50 ± 0.36 −1.80 ± 1.25
Aminotransferase gi|218563040 Cj1436c Part of capsule locus −0.30 ± 0.30 −1.53 ± 1.26 −2.03 ± 0.25
Hypothetical protein CJJ81176_1657 gi|121612948 Cj1666c Probable periplasmic protein −0.63 ± 0.46 −0.63 ± 0.51 −1.43 ± 0.38
  1. aProtein names in bold were also detected in previous experiments after growth on MH + 10% sheep blood. Some experiments returned values for the protein in only 2/3 experiments; these are marked with a `*'. Other information was the same as described in the footnote to Table 1.