Table 3 Pyrimidine dimer counts for B. ovatus and antibiotic resistant bacteria (ARBs)
From: Persistence of Bacteroides ovatus under simulated sunlight irradiation
| Â | Â | Dimers (count) | Dimers/amplicon length (%) | Dimers/total dimers (%) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Gene name | Genome size (bp) | TT | CC | TC | CT | Total | TT | CC | TC | CT | Total | TT | CC | TC | CT |
B. ovatus* | 6465369 | 612293 | 298804 | 413170 | 351734 | 1676001 | 9.5 | 4.6 | 6.4 | 5.4 | 26 | 36.5 | 17.8 | 24.7 | 21 |
Data on ARBs as a comparison from McKinney and Pruden, 2012 | |||||||||||||||
MRSA | 2872769 | 706446 | 145879 | 302081 | 766117 | 1431985 | 24.6 | 5.08 | 10.5 | 9.66 | 49.8 | 49.3 | 10.2 | 21.1 | 19.4 |
VRE | 2826716 | 638915 | 199341 | 373437 | 318366 | 1530059 | 22.6 | 7.05 | 13.2 | 11.3 | 54.1 | 41.8 | 13.0 | 24.4 | 20.8 |
E. coli SMS-3-5 | 5068389 | 746734 | 589024 | 584759 | 517931 | 2438448 | 14.7 | 11.6 | 11.5 | 10.2 | 48.1 | 30.6 | 24.2 | 24.0 | 21.2 |
P. aeruginosa 01 | 6264404 | 376612 | 1171802 | 766117 | 707725 | 3022256 | 6.01 | 18.7 | 12.2 | 11.3 | 48.2 | 12.5 | 38.8 | 25.3 | 23.4 |