Skip to main content

Table 4 Binding of GAG and GAG related structures from the glycan array analysis of twelve C. jejuni strains

From: Assessment of glycan interactions of clinical and avian isolates of Campylobacter jejuni

Glycan ID Human Chicken
  11168 351 375 520 81116 81–176 331 008 019 108 434 506
  RT 37 42 RT 37 42 RT 37 42 RT 37 42 RT 37 42 RT 37 42 RT 37 42 RT 37 42 RT 37 42 RT 37 42 RT 37 42 RT 37 42
12A + + + - - - - - - - - - + + + - - - - - - + + + + + + + + + + + + + + +
12B + + + - - - - - - - - - + + + - - - - - - + + + + + + + + + + + + + + +
12C + + + - - - - - - - - - + + + - - - - - - + + + + + + + + + + + + + + +
12D + + + - - - - - - - - - + + + - - - - - - + + + + + + + + + + + + + + +
12E + + + - - - - - - - - - + + + - - - - - - + + + + + + + + + + + + + + +
12 F + + + - - - - - - - - - + + + - - - - - - + + + + + + + + + + + + + + +
12G - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
12H - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
12I - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
12 J - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
12 K - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
12 L - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
12 M - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
12 N - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
12O - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
12P - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
13A - - - - - - - - - + + + + + + - - - - - - - - - - - - - - - - - - - - -
13B - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
13C - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
13D - - - - - - - - - - - - + + + - - - - - - - - - - - - - - - - - - - - -
13E - - - - - - - - - + + + + + + - - - + + + - - - - - - - - - - - - - - -
13 F + + + + + + + + + - - - + + + + + + - - - + + + - - - + + + + + + - - -
13G + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
13H + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
13I + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
13 J + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
13 K + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
13 L + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
13 M + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
13 N + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
13O + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
13P + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
14A + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
14B + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
14C + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
14D + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
14E + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
14 F + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
14G + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
14H + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
14I + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
  1. Each of the strains were analysed at room temperature (left), 37°C (middle) and 42°C (right). Binding +; No binding -. 12A-12 F are Carrageenan repeats; 12G-13E are digested Glycoaminoglycans in their most basic non-repeating unit (12G ΔUA-2S GlcNS-6S Na4 (I-S); 12H ΔUA GlucNS-6S Na3 (II-S); 12I ΔUA 2S-GlcNS Na3 (III-S); 12 J ΔUA 2S-GlcNAc-6S Na3 (I-A); 12 K ΔUA GlcNAc-6S Na2 (II-A); 12 L ΔUA 2S-GlcNAc Na2 (III-A); 12 M ΔUA GlcNAc Na (IV-A); 12 N ΔUA GalNAc-4S Na2 (ΔDi-4S); 12O ΔUA GalNAc-6S Na2 (ΔDi-6S); 12P ΔUA GalNAc-4S,6S Na3 (ΔDi-disE); 13A ΔUA 2S-GalNAc-4S Na2 (ΔDi-disB); 13B ΔUA 2S-GalNAc-6S Na3 (ΔDi-disD); 13C ΔUA 2S-GalNAc-4S-6S Na4 (ΔDi-tisS); 13D ΔUA 2S-GalNAc-6S Na2 (ΔDi-UA2S); 13E ΔUA GlcNAc Na (ΔDi-HA); 13 F-14I are larger repeating Glycoaminoglycans ranging from 4mers to 1.6MDa in size (13 F (GlcAβ1-3GlcNAcβ1-4)n (n = 4); 13G (GlcAβ1-3GlcNAcβ1-4)n (n = 8); 13H. (GlcAβ1-3GlcNAcβ1-4)n (n = 10); 13I (GlcAβ1-3GlcNAcβ1-4)n (n = 12); 13 J (GlcA/IdoAα/β1-4GlcNAcα1-4)n (n = 200); 13 K (GlcA/IdoAβ1-3(±4/6S)GalNAcβ1-4)n (n < 250); 13 L ((±2S)GlcA/IdoAα/b1-3(±4S)GalNAcβ1-4)n (n < 250);13 M (GlcA/IdoAβ1-3(±6S)GalNAcβ1-4)n (n < 250); 13 N (GlcAβ1-3GlcNAcβ1-4)n (n = 4); 130 (GlcAβ1-3GlcNAcβ1-4)n (n = 6); 13P (GlcAβ1-3GlcNAcβ1-4)n (n = 8); 14A (GlcAβ1-3GlcNAcβ1-4)n (n = 10); 14B (GlcAβ1-3GlcNAcβ1-4)n (n = 12); 14C (GlcAβ1-3GlcNAcβ1-4)n (n = 14); 14D(GlcAβ1-3GlcNAcβ1-4)n (n = 16); 14E (GlcAβ1-3GlcNAcβ1-4)n (30000 Da); 14 F (GlcAβ1-3GlcNAcβ1-4)n (107000 Da); 14G (GlcAβ1-3GlcNAcβ1-4)n (190000 Da); 14H (GlcAβ1-3GlcNAcβ1-4)n (220000 Da); 14I (GlcAβ1-3GlcNAcβ1-4)n (1600000 Da); 14 J (GlcA/IdoAα/ IdoASα/β1-4GlcNAc/GlcNS/GlcNAc6Sα1-4)n; 14 K (Glcβ1-4Glc)n; see Additional file 1: Table S1 for full list of glycan names and structures).