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Table 1 Description of gene expression data sets used in the study

From: Computational approaches for discovery of common immunomodulators in fungal infections: towards broad-spectrum immunotherapeutic interventions

ID Author(s) Acc # Pathogen Platform Target cell/tissue
  H. sapiens     
D1 Babiceanu et al. [*] GSE32893 A. alternata HG-U133_Plus_2 Epithelial
D2 Mezger et al.[19] GSE6965 A. fumigatus HG-U133_Plus_2 Dendritic
D3 Sharon et al.[21] GSE24983 A. fumigatus HG-U133A_2 Epithelial
D4 Mattingsdal et al. [*] E-MEXP-1103 A. fumigatus HG-U133_Plus_2 Monocytes
D5 Rubin-Bejerano et al. [*] E-MEXP-914 C. albicans HG-U133A_2 Neutrophils
D6 Rizzetto et al.[22] E-MTAB-135 C. albicans Illumina HumanHT-12 v3.0 Dendritic
D7 Müller et al.[23] GSE7355 C. albicans HG-U133A Endothelial
  R. norvegicus     
D8 Cheng et al.[24] GSE20149 P. jirovecii RG_U34A Macrophages
  M. musculus     
D9 Shimodaira et al. [*] GSE23178 S. chartarum Mouse430_2 Lung
  1. The columns from left to right are (i) data set id, (ii) authors and the publication associated with the data set, (iii) GEO or ArrayExpress accession number, (iv) pathogen name, (v) microarray platform, and (vi) cell/tissue type from which gene expression measurements were taken. Data sets are categorized by the host, namely, H. sapiens, R. norvegicus and M. musculus. [*] indicates the data set that does not have an associated publication.