Computational approaches for discovery of common immunomodulators in fungal infections: towards broad-spectrum immunotherapeutic interventions

Table 1 Description of gene expression data sets used in the study

ID	Author(s)	Acc #	Pathogen	Platform	Target cell/tissue
	*H. sapiens*
D1	Babiceanu et al. [*]	GSE32893	A. alternata	HG-U133_Plus_2	Epithelial
D2	Mezger et al.[19]	GSE6965	A. fumigatus	HG-U133_Plus_2	Dendritic
D3	Sharon et al.[21]	GSE24983	A. fumigatus	HG-U133A_2	Epithelial
D4	Mattingsdal et al. [*]	E-MEXP-1103	A. fumigatus	HG-U133_Plus_2	Monocytes
D5	Rubin-Bejerano et al. [*]	E-MEXP-914	C. albicans	HG-U133A_2	Neutrophils
D6	Rizzetto et al.[22]	E-MTAB-135	C. albicans	Illumina HumanHT-12 v3.0	Dendritic
D7	Müller et al.[23]	GSE7355	C. albicans	HG-U133A	Endothelial
	*R. norvegicus*
D8	Cheng et al.[24]	GSE20149	P. jirovecii	RG_U34A	Macrophages
	*M. musculus*
D9	Shimodaira et al. [*]	GSE23178	S. chartarum	Mouse430_2	Lung

The columns from left to right are (i) data set id, (ii) authors and the publication associated with the data set, (iii) GEO or ArrayExpress accession number, (iv) pathogen name, (v) microarray platform, and (vi) cell/tissue type from which gene expression measurements were taken. Data sets are categorized by the host, namely, H. sapiens, R. norvegicus and M. musculus. [*] indicates the data set that does not have an associated publication.

ISSN: 1471-2180