Figure 3

Differential expression of candidate genes in response to Wolbachia infection, depending on tissue and population. The Pi3 strain exhibits a strong ovarian phenotype after Wolbachia removal (no eggs in the ovaries), while the NA strain produces a few eggs that fail to develop normally. Quantitative RT-PCR was performed either in males or in ovaries (whole ovaries for the NA strain, and a distal part of the ovaries (DPOv) for the Pi3 strain). Details of the expression patterns are given in Additional file 3. The ratios between the average expression under aposymbiotic and symbiotic conditions are given. Genes over-expressed in symbiotic individuals are highlighted in blue; whereas those over-expressed in aposymbiotic individuals are highlighted in orange (Wilcoxon’s test on expression data, p-values adjusted using FDR’s correction). A dash indicates that there is no expression in the given tissue. Genes have been ordered within signaling pathways, and from the receptors to the effectors in immune pathways. Asterisks are assigned to pleiotropic genes implicated in several biological functions. PGRP: PeptidoGlycan Recognition Protein, SPE: Spätzle-Processing Enzyme, IAP: Inhibitor of APoptosis, TEP: ThiolEster-containing Protein, LCH: Light Chain, HCH: Heavy Chain, GST: Gluthatione-S-Transferase, SOD: SuperOxide Dismutase, HSP: Heat Shock Protein, TCTP: Translationally-Controlled Tumor Protein, ATG: Autophagy-related protein, Sxl: Sex-Lethal, MAPK: MAP kinase.