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Table 1 Endosymbiotic bacterial diversity and abundance in the four analysed Otiorhynchus species.

From: Assessment of bacterial endosymbiont diversity in Otiorhynchusspp. (Coleoptera: Curculionidae) larvae using a multitag 454 pyrosequencing approach

Bacteria from weevil species GenBank accession No. Number of reads % of total reads Closest phylogenetic match and 16S rDNA accession number Class
O. salicicola (in total 6073 reads) JN563736 5516 90.83 AB478978, endosymbiont of Pedicinus obtusus and AJ245596 endosymbiont of Camponotus balzanii (referred to as “Candidatus Blochmanni” endosymbionts throughout the text) γ-Proteobacteria
  JN563737 121 1.99 DQ417336, Schlegelella aquatica β-Proteobacteria
  JN563738 96 1.58 FJ268988, uncultured Acinetobacter γ-Proteobacteria
  JN563739 69 1.14 CU927677, uncultured bacterium -
  JN563740 48 0.79 FJ534956, uncultured bacterium -
  JN563741 44 0.72 EF210100, Enterobacter hormaechei γ-Proteobacteria
  JN563742 34 0.56 AY923125, Streptococcus sp. Bacilli
  JN563743 26 0.43 EU464962, uncultured bacterium -
  JN563744 25 0.41 EU766013, uncultured bacterium -
  JN563745 23 0.38 FJ393126, uncultured Bacteroides sp. Bacteroidetes
  JN563746 18 0.30 EU721814, uncultured epsilon proteobacterium ε-Proteobacteria
  JN563747 17 0.28 AY953252, Prevotella sp. Bacteroidetes
  JN563748 15 0.25 FJ799146, bacterium enrichment culture clone LA29 -
  JN563749 11 0.18 EU802152, uncultured bacterium -
  JN563750 10 0.16 AY568512, Burkholderia fungorum β-Proteobacteria
O. rugosostriatus (in total 8584 reads) JN563751 7800 90.87 AB021128, Rickettsia sp. α-Proteobacteria
  JN563752 396 4.61 EF633744, Candidatus Neoehrlichia lotoris α-Proteobacteria
  JN563753 338 3.94 AB478978, endosymbiont of Pedicinus obtusus and AJ245596 endosymbiont of Camponotus balzanii (referred to as “Candidatus Blochmanni” endosymbionts throughout the text) γ-Proteobacteria
  JN563754 17 0.20 AB021128, Rickettsia sp. α-Proteobacteria
  JN563755 11 0.13 EF633744, Candidatus Neoehrlichia lotoris α-Proteobacteria
  JN563756 7 0.08 AB021128, Rickettsia sp. α-Proteobacteria
  JN563757 6 0.07 AB021128, Rickettsia sp. α-Proteobacteria
  JN563758 5 0.06 FJ868862, uncultured bacterium -
  JN563759 4 0.05 GQ845011, Nevskia sp. γ-Proteobacteria
O. sulcatus (in total 6412 reads) JN563760 6358 99.16 AB021128, Rickettsia sp. α-Proteobacteria
  JN563761 35 0.55 EF633744, Candidatus Neoehrlichia lotoris α-Proteobacteria
  JN563762 19 0.30 EF633744, Candidatus Neoehrlichia lotoris α-Proteobacteria
O. armadillo (in total 6311 reads) JN563763 5900 93.49 AB478978, endosymbiont of Pedicinus obtusus and AJ245596 endosymbiont of Camponotus balzanii (referred to as “Candidatus Blochmanni” endosymbionts throughout the text) γ-Proteobacteria
  JN563764 60 0.95 FJ823944, uncultured Comamonas sp. β-Proteobacteria
  JN563765 54 0.86 FJ868862, uncultured bacterium -
  JN563766 43 0.68 FJ823944, uncultured Comamonas sp. β-Proteobacteria
  JN563767 35 0.55 FJ544375, Comamonas aquatica β-Proteobacteria
  JN563768 31 0.49 EU560802, uncultured bacterium -
  JN563769 23 0.36 DQ407746, primary endosymbiont of Liposcelis decolor -
  JN563770 21 0.33 DQ469223, uncultured bacterium -
  JN563771 21 0.33 GQ845011, Nevskia sp. γ-Proteobacteria
  JN563772 20 0.32 DQ860049, uncultured bacterium -
  JN563773 11 0.17 AF006670, Shewanella putrefaciens γ-Proteobacteria
  JN563774 11 0.17 X82133, Shewanella putrefaciens γ-Proteobacteria
  JN563775 11 0.17 EU801479, uncultured bacterium -
  JN563776 10 0.16 EF019306, uncultured proteobacterium -
  JN563777 9 0.14 AY953252, Prevotella sp. Bacteroidetes
  JN563778 8 0.13 EU464962, uncultured bacterium -
  JN563779 8 0.13 EU536078, uncultured bacterium -
  JN563780 8 0.13 GQ068015, uncultured bacterium -
  JN563781 8 0.13 L16490, Porphyromonas asaccharolytica Bacteroidetes
  JN563782 8 0.13 AY351787, uncultured marine bacterium -
  JN563783 6 0.10 EF648074, uncultured Azoarcus sp., β-Proteobacteria
  JN563784 5 0.08 EF648074, uncultured Azoarcus sp., β-Proteobacteria
  1. Only the closest relatives and their 16S rDNA accession numbers (see additional file 1: 16S rDNA gene-based phylogeny of endosymbionts in four different Otiorhynchus spp. larvae) are mentioned.