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Table 3 Distribution of the proteins identified by CMAT and 2D-PAGE across phage genomes

From: Identification of genes expressed in cultures of E. coli lysogens carrying the Shiga toxin-encoding prophage Φ24B

Gene Other Stx phages carrying the proteins in the study (identity) Accession number Other phages Accession number
CM1 Stx2 converting phage II (99%) YP_003828920.1   
  phage VT2-Sakai (99%) NP_050557.1   
  phage 933 W (99%) NP_049519.1   
  Stx1 converting phage (99%) YP_003848832   
  phage BP-933 W (99%) YP_003848832.1   
  phage VT2phi_272 (99%) ADU03741.1   
  phage Min27(100%) ADU03741   
CM2 Stx2 converting phage II (100%) BAC78116   
  phage VT2-Sakai (100%) NP_050531.1   
  phage Min27 (100%) YP_001648926   
  phage HK97 (99%) AAF31137   
  phage Lahn2 (99%) CAJ26400   
  phage Lahn3 (98%) CAC95062.1   
  phage 2851 (99%) CAQ82016   
  phage CP-1639(99%) CAC83142   
  prophage CP-933 V(99%) AAG57233   
  Phage Nil2 (99%)(99%) CAC95095   
  Stx1 converting phage (99%) YP_003848889.1   
  Phage CP-1639 (99%) CAC83142.1   
  Phage YYZ-2088 (99%) YP_002274170.1   
  Stx2-converting phage 1717 (99%) YP_002274244.1   
CM5 phage Min27 (100%) YP_001648966.1   
  Stx2 converting phage II(100%) YP_00388933.1   
  Stx2 converting phage I(100%) NP_612929.1   
  phage VT2-Sakai (100%) NP_050570.1   
  phage 933 W (100%) NP_049532.1   
  phage VT2phi_272 (100%) ADU03756   
CM7 phage VT2-Sakai (99%) NP_050570   
  Stx1 converting phage (99%) BAC77866.1   
  Phage VT2phi_272 (97%) ADU03756.1   
  Phage 933 W (97%) NP_049532.1   
  Stx2 converting phage I (97%) NP_612929.1   
  Stx2 converting phage II(97%) BAC78032.1   
  Phage BP-933 W (97%) AAG55616.1   
  Stx2 converting phage 86 (91%) YP_794082.1   
  Phage Min27 (97%) YP_001648966.1   
CM18 phage VT2-Sakai (100%) NP_050564.1   
  Stx1 converting phage (100%) YP_003848839.1   
  Phage 933 W (100%) NP_049526.1   
  Stx2 converting phage I (100%) ZP_02785836.1   
  Stx2 converting phage II (100%) YP_003828926.1   
  Phage BP-933 W (100%) NP_286999.1   
  Stx2 converting phage 86 (97%) YP_794076.1   
  Phage Min27 (100%) YP_001648959.1   
P1 Stx2 converting phage II (99%) YP_003828937.1 Phage phiV10 (78%) YP_512303.1
  Stx2 converting phage I (99%) NP_612952.1   
  Phage 933 W (99%) NP_049538.1   
  Phage BP-933 W (99%) AAG55619.1   
  phage VT2-Sakai (99%) NP_050575.1   
  Phage Min27 (96%) YP_001648901.1   
  Stx2-converting phage 86 (96%) YP_794094.1   
  Phage BP-4795 (96%) YP_001449244.1   
  phage CP-1639 (74%) CAC83133.1   
P2 Stx2 converting phage I (100%) NP_612997.1 Salmonella enteric YP_002455860.1
  Phage 933 W (100%) NP_049484.1 bacteriophage SE1 (86%)  
  Phage BP-933 W (100%) AAG55573.1 Salmonella phage ST160 (86%) YP_004123782.1
  Phage Min27 (100%) ABY49878.1   
  Stx2-converting phage 86 (100%) YP_794109.1   
P3 Stx2 converting phage I (100%) NP_612995.1   
  Phage 933 W (100%) NP_049483.1   
  Stx2-converting phage 86 (100%) YP_794108.1   
  Phage Min27 (100%) YP_001648915.1   
  Phage BP-933 W (100%) AAG55572.1   
P4 Phage 933 W (100%) NP_049473.1 Phage lambda (98%) NP_040616.1
  Phage BP-933 W (100%) NP_286952.1   
  Prophage CP-933 V (100%) NP_288695.1   
  Stx2 converting phage I (100%) NP_612980.1   
  Phage VT1-Sakai (100%) BAB19617.1   
  Phage YYZ-2008 (99%) YP_002274150.1   
  Stx2-converting phage 1717 (98%) YP_002274221.1   
  prophage CP-933 K (98%) YP_003500773.1   
  phage BP-4795 (98%) YP_001449249.1   
  phage Min27 (99%) YP_001648905.1   
P5 Stx2 converting phage I (100%) NP_613032.1   
  Phage 933 W (100%) NP_049503.1   
  Stx2 converting phage II (100%) BAC78139.1   
  Stx2-converting phage 1717 (98%) YP_002274255.1   
  phage 2851 (98%) CAE53952.1   
  Phage BP-4795 (97%) YP_0014419282.1   
P6 Stx2 converting phage I (99%) NP_612943.1   
  Stx2 converting phage II (99%) BAC78046.1   
  phage VT2phi_272 (99%) ADU03756.1   
  phage Min27 (99%) YP_001648966.1   
  phage VT2-Sakai (99%) NP_050570.1   
  Stx1 converting phage (99%) BAC77866.1   
  Stx2-converting phage 86 (96%) BAF34067.1