Table 3 Homology comparison of nucleotide and amino acid sequences of Capsid gene of YN08 isolates Getah virus with other Alphavirus isolates a
1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | |
|---|---|---|---|---|---|---|---|---|---|---|
1. ALPV_M1 | 99.66% | 99.66% | 99.66% | 98.97% | 97.57% | 99.66% | 99.31% | 99.66% | 99.31% | |
2. GETV_HB0234 | 98.50% | 99.31% | 100% | 98.62% | 97.22% | 100% | 99.66% | 100% | 98.97% | |
3. GETV_LEIV_16275_Mag | 98.85% | 97.79% | 99.31% | 98.62% | 97.22% | 99.31% | 98.97% | 99.31% | 98.97% | |
4. GETV_LEIV_17741_MPR | 99.20% | 98.85% | 98.27% | 98.62% | 97.22% | 100% | 99.66% | 100% | 98.97% | |
5. GETV_M1 | 99.67% | 98.15% | 98.50% | 98.85% | 96.51% | 98.62% | 98.27% | 98.62% | 98.27% | |
6. GETV_MM2021 | 96.25% | 95.14% | 95.90% | 95.64% | 95.88% | 97.22% | 96.87% | 97.22% | 97.57% | |
7. GETV_S_Korea | 98.62% | 99.66% | 97.91% | 98.97% | 98.27% | 95.27% | 99.66% | 100% | 98.97% | |
8. GETV_YN08 | 98.27% | 99.31% | 97.56% | 98.62% | 97.91% | 94.89% | 99.43% | 99.66% | 98.62% | |
9. GETV_YN0540 | 98.50% | 99.32% | 97.80% | 98.86% | 98.15% | 95.15% | 99.43% | 99.08% | 98.97% | |
10.SAGV | 98.03% | 97.2% | 98.04% | 97.68% | 97.68% | 96.50% | 97.32% | 96.96% | 97.44% |