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Table 1 Genomes sequences included in the study

From: Increased knowledge of Francisellagenus diversity highlights the benefits of optimised DNA-based assays

Species

ID

BioProject ID

F. tularensis subsp. holarctica

FSC200

16087

F. tularensis subsp. holarctica

FSC208

73467

F. tularensis subsp. holarctica

RC503

30637

F. tularensis subsp. holarctica

LVS

16421

F. tularensis subsp. holarctica

FSC539

73393

F. tularensis subsp. holarctica

OR96-246

30669

F. tularensis subsp. holarctica

FTA

20197

F. tularensis subsp. holarctica

URFT1

19645

F. tularensis subsp. holarctica

MI00-1730

30635

F. tularensis subsp. holarctica

OSU18

17265

F. tularensis subsp. holarctica

FSC021

73369

F. tularensis subsp. holarctica

FSC022

19015

F. tularensis subsp. mediasiatica

FSC147

19571

F. tularensis subsp. mediasiatica

FSC148

73379

F. tularensis subsp. tularensis

FSC054

73375

F. tularensis subsp. tularensis

ATCC6223

30629

F. tularensis subsp. tularensis

FSC033

19017

F. tularensis subsp. tularensis

MA00-2987

30443

F. tularensis subsp. tularensis

FSC198

17375

F. tularensis subsp. tularensis

SCHUS4 (FSC237)

9

F. novicida

FTE

30119

F. novicida

U112

16088

F. novicida

FTG

30447

F. novicida

GA99-3549

19019

F. novicida

FSC160

73385

F. novicida

FSC159

73383

F. novicida

GA99-3548

19573

F. hispaniensis

FSC454

73391

Wolbachia persica

FSC845

73171

F. noatunensis subsp. orientalis

FSC770

73389

F. noatunensis subsp. orientalis

FSC771

73447

F. noatunensis subsp. noatunensis

FSC846

73463

F. noatunensis subsp. noatunensis

FSC769

73397

F. noatunensis subsp. noatunensis

FSC774

73457

F. noatunensis subsp. noatunensis

FDC178

73465

F. noatunensis subsp. noatunensis

FSC772

73449

F. philomiragia

FSC154

73381

F. philomiragia

FSC145

73377

F. philomiragia

ATCC25015

32411

F. philomiragia

FSC037

73371

F. philomiragia

FSC039

73373

F. philomiragia

ATCC25017

27853

  1. Francisella genomes included in this study selected to represent the known diversity of Francisella: 22 strains representing the public health perspective of F. tularensis (clade 1) and 13 strains of F. noatunensis and F. philomiragia (clade 2) representing a fish farming industry and health perspective.