Skip to main content

Advertisement

Table 1 Genomes sequences included in the study

From: Increased knowledge of Francisellagenus diversity highlights the benefits of optimised DNA-based assays

Species ID BioProject ID
F. tularensis subsp. holarctica FSC200 16087
F. tularensis subsp. holarctica FSC208 73467
F. tularensis subsp. holarctica RC503 30637
F. tularensis subsp. holarctica LVS 16421
F. tularensis subsp. holarctica FSC539 73393
F. tularensis subsp. holarctica OR96-246 30669
F. tularensis subsp. holarctica FTA 20197
F. tularensis subsp. holarctica URFT1 19645
F. tularensis subsp. holarctica MI00-1730 30635
F. tularensis subsp. holarctica OSU18 17265
F. tularensis subsp. holarctica FSC021 73369
F. tularensis subsp. holarctica FSC022 19015
F. tularensis subsp. mediasiatica FSC147 19571
F. tularensis subsp. mediasiatica FSC148 73379
F. tularensis subsp. tularensis FSC054 73375
F. tularensis subsp. tularensis ATCC6223 30629
F. tularensis subsp. tularensis FSC033 19017
F. tularensis subsp. tularensis MA00-2987 30443
F. tularensis subsp. tularensis FSC198 17375
F. tularensis subsp. tularensis SCHUS4 (FSC237) 9
F. novicida FTE 30119
F. novicida U112 16088
F. novicida FTG 30447
F. novicida GA99-3549 19019
F. novicida FSC160 73385
F. novicida FSC159 73383
F. novicida GA99-3548 19573
F. hispaniensis FSC454 73391
Wolbachia persica FSC845 73171
F. noatunensis subsp. orientalis FSC770 73389
F. noatunensis subsp. orientalis FSC771 73447
F. noatunensis subsp. noatunensis FSC846 73463
F. noatunensis subsp. noatunensis FSC769 73397
F. noatunensis subsp. noatunensis FSC774 73457
F. noatunensis subsp. noatunensis FDC178 73465
F. noatunensis subsp. noatunensis FSC772 73449
F. philomiragia FSC154 73381
F. philomiragia FSC145 73377
F. philomiragia ATCC25015 32411
F. philomiragia FSC037 73371
F. philomiragia FSC039 73373
F. philomiragia ATCC25017 27853
  1. Francisella genomes included in this study selected to represent the known diversity of Francisella: 22 strains representing the public health perspective of F. tularensis (clade 1) and 13 strains of F. noatunensis and F. philomiragia (clade 2) representing a fish farming industry and health perspective.