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Table 1 TargetRNA predictions for sYJ20

From: Tigecycline challenge triggers sRNA production in Salmonella enterica serovar Typhimurium

Rank

Gene

Synonym

Score

p-value

sRNA start

sRNA stop

mRNA start

mRNA stop

1

pspB

STM1689

−60

0.00598756

17

28

9

−3

2

nrdI

STM2806

−60

0.00598756

17

28

9

−3

3

STM0269

STM0269

−59

0.00721216

7

29

16

−4

4

pspA

STM1690

−59

0.00721216

35

60

14

−10

  1. The sequence of sYJ20 (as shown in Figure5, bold letters) was applied as the input for TargetRNA (http://snowwhite.wellesley.edu/targetRNA/) prediction with default parameters.
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BMC Microbiology

ISSN: 1471-2180

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