Name | Gene | Function | LB with iron chelatorapS88 | p b | Human serumex vivoapS88 | p b | Human urineex vivoapS88 | p b | Human urinein vivoapAMM |
---|---|---|---|---|---|---|---|---|---|
pS88001 | int | Putative site-specific recombinase | 0.85 | 0.775 | 0.59 | 0.427 | 0.73 | 0.505 | 0.84 |
pS88002 | repA | RepFIB replication protein RepA | 0.41 | 0.305 | 0.97 | 0.976 | 0.89 | 0.889 | 3.56 |
pS88003 | Conserved hypothetical protein | 1.67 | 0.496 | 1.26 | 0.758 | 3.09 | 0.159 | 7.26 | |
pS88004 | Conserved hypothetical protein | 0.93 | 0.883 | 0.58 | 0.266 | 0.60 | 0.459 | 2.52 | |
pS88006 | Putative fragment of ImpB UV protection protein | 0.48 | 0.578 | 0.77 | 0.550 | 1.51 | 0.367 | 1.17 | |
pS88009 | iutA | Ferric aerobactin receptor precursor IutA | 4.12 | 0.007 | 4.23 | 0.006 | 4.01 | 0.048 | 9.02 |
pS88013 | iucA | Aerobactin siderophore biosynthesis protein IucA | 45.25 | 0.005 | 15.85 | 0.023 | 18.38 | 0.026 | 168.12 |
pS88014 | shiF | Putative membrane transport protein ShiF | 7.66 | 0.006 | 14.03 | 0.005 | 14.19 | 0.004 | 17.71 |
pS88015 | Putative membrane protein; CrcB-like protein | 2.40 | 0.105 | 0.82 | 0.807 | 4.19 | 0.051 | 6.08 | |
pS88016 | Conserved hypothetical protein | 1.77 | 0.250 | 1.65 | 0.628 | 4.14 | 0.066 | 9.74 | |
pS88017 | Putative enolase | 1.47 | 0.573 | 5.44 | 0.152 | 7.98 | 0.040 | 18.68 | |
pS88019 | sitD | SitD protein; iron transport protein | 4.54 | 0.020 | 38.23 | 0.003 | 26.29 | 0.004 | 139.75 |
pS88022 | sitA | SitA protein; iron transport protein | 17.79 | 0.002 | 49.52 | 0.003 | 83.87 | 0.001 | 776.05 |
pS88026 | Hypothetical protein | 1.32 | 0.633 | 1.04 | 0.959 | 1.02 | 0.981 | / c | |
pS88027 | Hypothetical protein; putative exported protein | 0.70 | 0.626 | 1.04 | 0.956 | 0.31 | 0.187 | / | |
pS88028 | Conserved hypothetical protein | 1.11 | 0.809 | 0.75 | 0.577 | 1.16 | 0.762 | / | |
pS88029 | Conserved hypothetical protein | 1.30 | 0.712 | 1.22 | 0.751 | 2.20 | 0.260 | / | |
pS88030 | Conserved hypothetical protein | 0.30 | 0.098 | 0.46 | 0.308 | 0.32 | 0.143 | 1.09 | |
pS88031 | Hypothetical protein | 0.67 | 0.405 | 0.97 | 0.959 | 1.58 | 0.369 | 2.08 | |
pS88037 | sopA | SopA protein (Plasmid partition protein A) | 0.60 | 0.227 | 0.47 | 0.147 | 1.12 | 0.847 | 0.98 |
pS88038 | sopB | SopB protein (Plasmid partition protein B) | 0.38 | 0.021 | 0.91 | 0.879 | 1.41 | 0.696 | 3.32 |
pS88039 | Hypothetical protein | 0.63 | 0.312 | 2.19 | 0.330 | 3.82 | 0.031 | 2.96 | |
pS88040 | Conserved hypothetical protein | 0.73 | 0.510 | 2.74 | 0.240 | 3.61 | 0.031 | 3.61 | |
pS88041 | Hypothetical protein | 1.39 | 0.295 | 0.42 | 0.174 | 1.77 | 0.092 | 1.47 | |
pS88043 | Hypothetical protein | 0.89 | 0.782 | 1.47 | 0.378 | 2.00 | 0.188 | 1.83 | |
pS88044 | yubI | Putative antirestriction protein | 1.35 | 0.720 | 1.13 | 0.890 | 0.99 | 0.991 | 3.38 |
pS88045 | Conserved hypothetical protein | 0.95 | 0.919 | 1.66 | 0.403 | 1.09 | 0.873 | 4.52 | |
pS88046 | Conserved hypothetical protein | 0.80 | 0.717 | 1.38 | 0.661 | 1.25 | 0.735 | 2.07 | |
pS88047 | ydbA | Conserved hypothetical protein | 1.71 | 0.542 | 0.99 | 0.987 | 1.33 | 0.739 | 4.18 |
pS88048 | ydcA | Putative adenine-specific DNA methylase | 1.44 | 0.652 | 1.09 | 0.917 | 1.52 | 0.606 | 3.98 |
pS88050 | ssb | Single-stranded DNA-binding protein | 1.56 | 0.383 | 2.42 | 0.152 | 1.96 | 0.211 | 2.91 |
pS88051 | yubL | Conserved hypothetical protein | 0.90 | 0.832 | 1.21 | 0.842 | 2.13 | 0.203 | 2.05 |
pS88054 | ycjA | Putative DNA-binding protein involved in plasmid partitioning (ParB-like partition protein) | 1.31 | 0.260 | 2.60 | 0.392 | 3.45 | 0.007 | 2.30 |
pS88055 | psiB | Plasmid SOS inhibition protein B | 0.74 | 0.414 | 5.34 | 0.094 | 3.26 | 0.026 | 4.03 |
pS88056 | psiA | Plasmid SOS inhibition protein A | 1.67 | 0.321 | 13.06 | 0.048 | 6.44 | 0.016 | 3.02 |
pS88057 | flmC | Putative F-plasmid maintenance protein C | 2.27 | 0.144 | 0.55 | 0.346 | 0.65 | 0.401 | 2.21 |
pS88059 | yubN | Conserved hypothetical protein | 2.01 | 0.441 | 0.90 | 0.902 | 1.20 | 0.826 | 3.52 |
pS88060 | yubO | Conserved hypothetical protein | 1.13 | 0.781 | 1.79 | 0.211 | 2.24 | 0.075 | 3.89 |
pS88061 | yubP | Conserved hypothetical protein | 1.43 | 0.397 | 2.40 | 0.109 | 1.72 | 0.408 | 4.27 |
pS88062 | yubQ | X polypeptide (P19 protein); Putative transglycosylase | 0.94 | 0.948 | 0.88 | 0.910 | 1.20 | 0.852 | 4.90 |
pS88063 | traM | Protein TraM (Conjugal transfer protein M) | 0.77 | 0.313 | 0.94 | 0.866 | 0.92 | 0.769 | 0.25 |
pS88064 | traJ | Protein TraJ (Positive regulator of conjugal transfer operon) | 0.39 | 0.212 | 2.86 | 0.310 | 1.08 | 0.898 | 1.98 |
pS88066 | traA | Fimbrial protein precursor TraA (Pilin) | 1.59 | 0.053 | 0.54 | 0.188 | 0.19 | 0.004 | 0.21 |
pS88092 | traT | Complement resistance and surface exclusion outer membrane protein TraT | 0.27 | 0.265 | 0.54 | 0.573 | 0.82 | 0.847 | 0.35 |
pS88095 | traX | F pilin acetylase TraX | 0.56 | 0.157 | 0.54 | 0.409 | 0.72 | 0.389 | 0.88 |
pS88096 | finO | Fertility inhibition protein FinO (Conjugal transfer repressor) | 0.49 | 0.127 | 0.98 | 0.968 | 0.88 | 0.732 | 1.21 |
pS88097 | yigA | Conserved hypothetical protein YigA | 1.22 | 0.803 | 2.08 | 0.427 | 0.95 | 0.953 | 0.50 |
pS88098 | yigB | Putative nuclease YigB | 0.46 | 0.241 | 0.47 | 0.463 | 1.34 | 0.648 | 2.34 |
pS88099 | repA2 | Replication regulatory protein RepA2 (Protein CopB) | 1.27 | 0.340 | 1.43 | 0.199 | 2.24 | 0.071 | 1.93 |
pS88100 | repA1 | Replication initiation protein RepA1 | 0.56 | 0.120 | 1.14 | 0.702 | 2.18 | 0.072 | 1.53 |
pS88101 | yacA | Conserved hypothetical protein YacA. possible repressor | 0.49 | 0.344 | 0.96 | 0.961 | 0.41 | 0.293 | 4.30 |
pS88102 | yacB | Putative plasmid stabilization system protein YacB | 0.31 | 0.169 | 0.64 | 0.502 | 0.32 | 0.227 | 1.57 |
pS88103 | yacC | Putative exoribonuclease YacC | 0.38 | 0.209 | 0.56 | 0.461 | 0.50 | 0.369 | 0.95 |
pS88104 | cia | Colicin-Ia | 5.11 | 0.105 | 21.06 | 0.023 | 6.03 | 0.087 | 70.36 |
pS88105 | imm | Colicin-Ia immunity protein | 1.10 | 0.944 | 5.58 | 0.048 | 3.46 | 0.106 | 3.17 |
pS88106 | ybaA | Conserved hypothetical protein YbaA | 5.25 | 0.197 | 4.87 | 0.189 | 8.90 | 0.096 | 3.27 |
pS88108 | ydeA | Conserved hypothetical protein YdeA | 0.45 | 0.247 | 0.31 | 0.165 | 0.41 | 0.222 | 0.51 |
pS88109 | ydfA | Conserved hypothetical protein YdfA | 0.17 | 0.119 | 0.69 | 0.733 | 0.36 | 0.284 | 0.58 |
pS88110 | Putative acetyltransferase | 0.71 | 0.606 | 0.98 | 0.983 | 0.77 | 0.684 | 1.57 | |
pS88111 | Predicted dehydrogenase | 1.41 | 0.562 | 0.31 | 0.126 | 0.88 | 0.801 | 1.48 | |
pS88112 | Predicted dehydrogenase | 1.25 | 0.691 | 0.63 | 0.416 | 1.19 | 0.736 | 0.87 | |
pS88113 | Predicted dehydrogenase | 0.92 | 0.893 | 1.13 | 0.850 | 1.65 | 0.509 | 3.02 | |
pS88114 | cvi | Microcin V immunity protein | 0.84 | 0.735 | 1.13 | 0.846 | 2.17 | 0.203 | 4.48 |
pS88115 | cvaC | Microcin V precursor (Microcin V bacteriocin) | 21.96 | 0.007 | 17.27 | 0.010 | 29.58 | 0.016 | 61.11 |
pS88116 | cvaB | Microcin V secretion/processing ATP-binding protein CvaB | 12.88 | 0.010 | 17.55 | 0.001 | 19.43 | 0.006 | 162.02 |
pS88117 | cvaA | Microcin V secretion protein CvaA | 26.23 | 0.012 | 44.02 | 0.005 | 43.81 | 0.019 | 215.77 |
pS88118 | Conserved hypothetical protein | 3.99 | 0.095 | 4.66 | 0.066 | 3.32 | 0.219 | 7.46 | |
pS88123 | Putative Phospho-2-dehydro-3-deoxyheptonatealdolase | 354.6 | 0.000 | 190.9 | 0.001 | 109.6 | 0.006 | 144.67 | |
pS88124 | iroN | IroN. Salmochelin siderophore receptor | 2.94 | 0.137 | 2.14 | 0.465 | 1.95 | 0.394 | 28.97 |
pS88128 | iroB | IroB. Putative glucosyltransferase | 72.17 | 0.001 | 48.95 | 0.002 | 37.97 | 0.014 | 69.71 |
pS88130 | Conserved hypothetical protein | 1.84 | 0.336 | 3.36 | 0.198 | 10.36 | 0.029 | 3.10 | |
pS88131 | Conserved hypothetical protein | 2.43 | 0.318 | 9.11 | 0.031 | 13.83 | 0.039 | 14.66 | |
pS88132 | Hypothetical protein | 0.20 | 0.013 | 0.95 | 0.871 | 0.63 | 0.482 | 0.40 | |
pS88133 | iss | Iss (Increased serum survival) | 0.28 | 0.083 | 0.48 | 0.282 | 0.36 | 0.151 | 0.66 |
pS88136 | Hypothetical protein | 0.93 | 0.896 | 1.51 | 0.618 | 1.71 | 0.391 | 0.65 | |
pS88137 | Conserved hypothetical protein; Putative GTPase | 0.40 | 0.263 | 0.52 | 0.504 | 0.64 | 0.580 | 1.59 | |
pS88142 | Conserved hypothetical protein | 0.51 | 0.096 | 0.48 | 0.134 | 0.77 | 0.458 | / | |
pS88143 | Conserved hypothetical protein | 0.57 | 0.090 | 0.70 | 0.646 | 0.84 | 0.750 | / | |
pS88146 | etsC | Putative type I secretion outer membrane protein EtsC | 1.05 | 0.893 | 0.42 | 0.208 | 0.78 | 0.478 | 0.61 |
pS88148 | etsA | Putative type I secretion membrane-fusion protein EtsA | 0.49 | 0.126 | 0.34 | 0.211 | 0.36 | 0.050 | 0.31 |
pS88154 | Hypothetical protein | 0.47 | 0.330 | 4.44 | 0.163 | 1.25 | 0.790 | 3.00 | |
pS88155 | ompT | Outer membrane protease (omptin) | 0.48 | 0.178 | 0.43 | 0.092 | 0.42 | 0.137 | 0.37 |
pS88156 | hlyF | Hemolysin HlyF | 1.02 | 0.981 | 0.44 | 0.402 | 0.72 | 0.507 | 0.14 |
pS88157 | Conserved hypothetical protein; putative Mig-14 protein | 1.11 | 0.921 | 0.47 | 0.376 | 0.94 | 0.942 | 0.11 | |
S88-1832 | gapA d | Glyceraldehyde-3-phosphate dehydrogenase | 1.70 | 0.396 | 0.46 | 0.254 | 1.15 | 0.789 | 0.90 |
S88-0266 | dinB d | DNA polymerase IV | 0.69 | 0.343 | 2.36 | 0.131 | 0.69 | 0.317 | 0.90 |
S88-4457 | yjaD d | NADH pyrophophatase | 0.85 | 0.586 | 0.91 | 0.698 | 1.26 | 0.344 | 1.24 |