Table 1 Chlamydial sequences analysed in this study
From: Novel molecular markers of Chlamydia pecorum genetic diversity in the koala (Phascolarctos cinereus)
Species | Strain | Origin | Host | Pathology | Sequence reference |
|---|---|---|---|---|---|
C. abortus | S26/3 | Scotland | Sheep | Abortion | [62] |
C. caviae | GPIC | USA | Guinea Pig | Conjunctivitis | [63] |
C. felis | Fe/C-56 | Japan | Cat | Pneumonia | [64] |
C. muridarum | Nigg | USA | Mouse | Pneumonia | [65] |
C. pecorum | 824 | Scotland | Sheep | Conjunctivitis | [21] |
C. pecorum | AB10 | France | Sheep | Abortion | [21] |
C. pecorum | AKT | Tunis | Sheep | Abortion | [21] |
C. pecorum | BE53 | England | Cattle | Encephalymylitis | [21] |
C. pecorum | E58 | USA | Cattle | Encephalomylitis | [21] |
C. pecorum | iB1 | France | Sheep | Healthy (faeces) | [21] |
C. pecorum | iB2 | France | Sheep | Healthy (faeces) | [21] |
C. pecorum | iB3 | France | Sheep | Healthy (faeces) | [21] |
C. pecorum | iB4 | France | Sheep | Healthy (faeces) | [21] |
C. pecorum | iB5 | France | Sheep | Healthy (faeces) | [21] |
C. pecorum | iC2 | France | Goat | Healthy (faeces) | [21] |
C. pecorum | iC3 | France | Goat | Healthy (faeces) | [21] |
C. pecorum | iC4 | France | Goat | Healthy (faeces) | [21] |
C. pecorum | LW679 | USA | Sheep | Arthritis | [21] |
C. pecorum | M14 | Morocco | Goat | Abortion | [21] |
C. pecorum | MC/MarsBar | Australia | Koala | Genital tract infection | (this work) |
C. pecorum | R69 | Ireland | Sheep | Healthy (faeces) | [21] |
C. pecorum | SBE | England | Cattle | Encephalomylitis | [21] |
C. pecorum | VB2 | France | Sheep | Orchitis | [21] |
C. pecorum | W73 | Ireland | Sheep | Healthy (faeces) | [21] |
C. pneumoniae | CWL029 | USA | Human | Pneumonia | [62] |
C. trachomatis | A/HAR-13 | Saudi Arabia | Human | Conjunctivitis | [63] |
C. trachomatis | B/Jali20/OT | The Gambia | Human | Conjunctivitis | [62] |
C. trachomatis | B/TZ1A828/OT | Tanzania | Human | Conjunctivitis | [64] |
C. trachomatis | D/UW-3/CX | USA | Human | Genital tract infection | [65] |
C. trachomatis | L2/434/Bu | USA | Human | Bubo | [66] |
C. trachomatis | L2b/UCH-1/proctitis | England | Human | Proctitis | [66] |