Table 3 The variable sites alignment of gdh gene fragment of G.duodenalis in 22 isolates of assemblage B.

ATCC50581

CTGACGCGTC

TCGCCCTGTG

CCGCCAAG

HT105

........C.

HT123C1

........C.

...T....

HT123C10

....T.....

......C.C.

.....G..

HT123C2

....T.....

........C.

...T....

HT123C4

....T.....

........C.

.T.T....

HT123C7

........C.

.T.T....

HT140

......T...

........C.

HT142

HT187C1

.T.....AC.

HT187C2

........C.

HT187C3

....T.....

.T.....AC.

.....G..

HT187C4

....T.....

....T..A

HT187C5

....T.....

....T.....

....T..A

HT187C6

....T.....

.T.....AC.

....T..A

HT187C8

....T.....

........C.

HT193C1

....T.....

..A.....

HT193C2

..A.....

HT193C8

....T.....

....T.....

....T..A

HT193C9

......C.C.

.....G..

HT57C1

HT57C2

..A.....C.

.T......

HT57C3

........C.

.T......

HT57C5

...G......

G.........

HT57C8

G.........

Or172C1

.C..T....T

.T...TC.C.

.....G..

Or172C2

.........T

........C.

....T...

Or172C3

G..G......

.T...TC.C.

.....G..

Or172C4

....T.....

........C.

Or172C5

........C.

........C.

.....G..

Or172C6

.C..T....T

.T......C.

Or172C7

.T...TC.C.

.....G..

Or172C8

.........T

.T...TC.C.

.....G..

Or176C1

........C.

Or176C2

........C.

....T...

Or176C9

........C.

........C.

....T...

Or284

....T.....

....T...

Pre016

........C.

Pre1117

.C..T....T

.....TC.CA

.....G..

Pre1402C1

....T..A

Pre1402C2

....T.....

........C.

....T..A

Pre1402C4

.......A..

....T...C.

.......A

Pre1402C5

........C.

Pre1402C6

.......A..

........C.

Pre1402C7

....T..A..

.......AC.

Pre1402C8

....T.....

........C.

....T...

Pre1402C9

....T..A..

....T...C.

....T...

Pre2018

........C.

Pre2103C1

..A.....C.

Pre2103C2

..A.....C.

T.......

Pre2103C3

........C.

Pre2103C5

........C.

T.......

Pre2320

....T.....

....T.....

....T..A

Pre2403C1

.....TC.C.

...T..G.

Pre2403C10

.........T

.....T..C.

.T..T...

Pre2403C2

G.........

...T....C.

........

Pre2403C3

.C...A....

........C.

....T...

Pre2403C4

..A..A....

........C.

.T..T...

Pre2403C5

.........T

........C.

.T..T...

Pre2403C6

...T....C.

.T......

Pre2403C7

..A..A...T

.....TC.C.

...T..G.

Pre2403C8

.........T

.....TC.C.

...T..G.

Pre3207

........C.

......G.

TSH090

..A.....C.

TSH1119

..A.....C.

TSH1210

........C.

...T....

TSH1250

........C.

Amino Acid

LLKNLPDDPF

STQGGIYEFT

GVTGFRTG

V..D...N..

A.........