Table 4 Distribution of gene determinant among isolation sources
| Percentage of gene determinant presence (confidence interval at 95%) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sources | No. of isolates | DT104 16S-23S spacer | ssaQ | mgtC | spi4_D | sopB | spvC | SGI1 left junction | intI1 | bla TEM | sul1 |
| Pigs | 61 |
66 (52.31-77.27) |
100 (95.21-100) |
100 (95.21-100) |
98 (91.2-99.96) |
100 (95.21-100) |
89 (77.78-95.26) |
67 (54-78.69) |
75 (62.71-85.54) |
18 (9.36-29.98) |
75 (62.71-85.54) |
| Poultry | 212 |
34 (27.62-40.76) |
100 (98.60-100) |
100 (98.60-100) |
100 (98.60-100) |
100 (98.60-100) |
80 (74.18-85.33) |
37 (30.29-43.67) |
39 (32.54-46.07) |
10 (6.24-14-74) |
41 (34.35-47.98) |
| Cattle | 67 |
65 (53.06-76.85) |
100 (95.63-100) |
100 (95.63-100) |
98 (91.96-99.96) |
100 (95.63-100) |
86 (76.03-93.67) |
65 (53.06-76.85) |
71 (59.31-81.99) |
8 (2.47-16.56) |
76 (64.14-85.69) |
| Other animal species1 | 51 |
31 (24.13-51.92) |
98 (89.55-99.95) |
100 (94.3-100) |
98 (89.55-99.95) |
100 (94.3-100) |
82 (69.13-91.6) |
31 (19.11-45.89) |
43 (29.35-57.75) |
12 (4.44-23.87) |
47 (32.93-61.54) |
| Food products2 | 90 |
53 (42.51-63.93) |
100 (96.73-100) |
100 (96.73-100) |
100 (96.73-100) |
100 (96.73-100) |
78 (67.79-85.87) |
49 (38.2-59.65) |
52 (41.43-62.87) |
11 (5.46-19.49) |
56 (44.7-66.04) |
| Human | 28 |
71 (51.33-86.78) |
100 (89.85-100) |
100 (89.85-100) |
100 (89.85-100) |
100 (89.85-100) |
86 (67.33-95.97) |
57 (37.18-75.54) |
64 (44.07-81.36) |
36 (18.64-55.93) |
64 (44.07-81.36) |
| Environment | 23 |
61 (38.54-80.29) |
96 (78.05-99.89) |
100 (87.79-100) |
100 (87.79-100) |
96 (78.05-99.89) |
91 (71.96-98.93) |
61 (38.54-80.29) |
61 (38.54-80.29) |
9 (1.07-28.04) |
65 (42.73-83.62) |
| Unknown | 6 |
0 (0-39.3) |
100 (60.7-100) |
100 (60.7-100) |
100 (60.7-100) |
100 (60.7-100) |
67 (22.28-95.67) |
0 (0-39.3) |
17 (0.42-64.12) |
33 (4.22-77.72) |
17 (0.42-64.12) |
| Total | 538 | 47 | 99 | 100 | 99 | 99 | 82 | 47 | 52 | 12 | 54 |
