Skip to main content

Advertisement

Table 3 List of cell wall and capsule SEED subsystem functions overabundant in swine fecal metagenome

From: Comparative fecal metagenomics unveils unique functional capacity of the swine gut

  Pig Feces Human Adult Human Infant Cow Rumen Termite Gut Mouse Cecum Fish gut
putative glycosyltransferase - possibly involved in cell wall localization and side chain formation of rhamnose-glucose polysaccharide 112 9 10 10 0 1 0
Phosphoglucosamine mutase (EC 5.4.2.10) 97 18 9 0 20 0 1
COG3178: Predicted phosphotransferase related to Ser/Thr protein kinases 66 10 6 4 5 2 1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 27 10 9 2 0 1 3
O-antigen export system, permease protein 23 3 2 4 0 0 1
Glutamine synthetase, clostridia type (EC 6.3.1.2) 21 4 1 3 0 0 0
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase 20 7 6 1 0 5 0
UDP-glucose 4-epimerase (EC 5.1.3.2) 14 1 2 0 9 1 1
Capsular polysaccharide synthesis enzyme Cap8D 9 0 1 1 0 0 0
D-alanine--D-alanine ligase B (EC 6.3.2.4) 8 0 0 0 0 0 0
PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) 7 0 0 0 0 0 0
Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) 5 0 0 0 0 0 0
2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) 3 0 0 0 0 0 0
capsular polysaccharide biosynthesis protein, putative 3 0 0 0 0 0 0
Capsular polysaccharide synthesis enzyme Cap8L 3 0 0 0 0 0 0