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Table 2 Primer sequences and PCR conditions.

From: Interactions between endocarditis-derived Streptococcus gallolyticus subsp. gallolyticus isolates and human endothelial cells

Primer

Oligonucleotide sequence (5'-3')

Nucleotide positions*

Annealing temperature

Amplicon length

Genbank accession no.

fimB-550F

GGTAAGTGATGGTATTGATGTC

550-571

45

347

AY321316

fimB-875R

GTGTTCCTTCTTCCTCAGTATT

875-896

   

gtf-F

GGTGAGACTTGGGTTGATTC

2049-2068

54

496

AB292595

gtf-R

GCTCTGCTTGAACAACTGGA

2525-2544

   

pilB-385F

AAGGGACGAGGGCTCTAC

120017-120034

58

339

CP000408

pilB-722R

ACCCAATTCCAACATACG

120373-120356

   
  1. *positions according to the respective Genbank accession no.