Table 1 List of strains analyzed in this study with source, sodA GenBank accession numbers, distribution of virulence gene sequences detected by PCR and occurrence of intestinal abnormalities.
S. gallolyticus strain | Sod A GenBank acc. no. | Source | gtf 1 | pilB 2 | fimB 3 | intestinal abnormalities |
|---|---|---|---|---|---|---|
DSM 16831 | FJ617226 | feces, koala | + | - | + | not applicable |
DSM 13808 | FJ617227 | sapropel | + | + | + | not applicable |
Isolate 12932 | FJ042703 | heart valve culture, IE patient | + | - | + | nondistinctive tumour of the mesenteric root |
Isolate 00718 | FJ617228 | heart valve culture, IE patient | - | - | + | irregular-shaped mucosa erythema Bulbus duodeni without oedema |
Isolate 10288 | FJ151353 | heart valve culture, IE patient | + | + | + | clinical data not available |
Isolate 03080 | FJ151354 | heart valve culture, IE patient | + | + | + | engrained rectal carcinoma |
Isolate 10672 | FJ151355 | heart valve culture, IE patient | + | + | + | clinical data not available |
Isolate 06718 | FJ151356 | heart valve culture, IE patient | + | + | + | pea-sized colon polyp with mucosa breakdown |
Isolate 07849 | FJ151357 | heart valve culture, IE patient | + | - | + | inconspicuous gastroscopy and colonoscopy |
Isolate 21702 | FJ151358 | heart valve culture, IE patient | + | + | + | swelling of intestinal wall in terms of chronic colon ischemia |
ATCC 49475 | FJ617229 | clinical isolate of unknown origin | + | - | + | not applicable |
ATCC 49147 | FJ617230 | clinical isolate of unknown origin | + | - | + | not applicable |
Isolate 134257 | FJ151359 | heart valve culture, IE patient | + | - | + | inconspicuous gastroscopy and colonoscopy |
Isolate 05950 | FJ151360 | heart valve culture, IE patient | + | + | + | clinical data not available |
Isolate 13366 | FJ151361 | heart valve culture, IE patient | + | + | + | inconspicuous gastroscopy and colonoscopy |
Isolate K6236 | FJ151362 | blood culture, IE patient | + | - | + | clinical data not available |
Isolate AC6860 | FJ617231 | human clinical isolate | + | + | + | clinical data not available |
Isolate AC1016 | FJ617232 | human clinical isolate | + | - | + | clinical data not available |
Isolate AC1135 | FJ617233 | human clinical isolate | - | - | + | clinical data not available |
Isolate AC1181 | FJ151364 | human clinical isolate | - | - | + | clinical data not available |
Isolate AC1242 | FJ151365 | human clinical isolate | - | - | + | clinical data not available |
Isolate AC7070 | FJ617234 | human clinical isolate | + | - | + | clinical data not available |
Isolate AC6872 | FJ151367 | human clinical isolate | + | - | + | clinical data not available |