Table 2 Clinical specimens analyzed in the present study.
From: Rapid Leptospira identification by direct sequencing of the diagnostic PCR products in New Caledonia
Specimen identification | Source | Leptospira concentration based on qPCR[15] | lfb1-based cluster (see results) |
|---|---|---|---|
08323250 | Human serum | < 50/ml | L. borgpetersenii 1 |
08238362 | Human serum | < 50/ml | L. interrogans 3 |
09022251 | Human serum | < 50/ml | L. interrogans 2 |
09037333 | Human serum | < 50/ml | L. interrogans 3 |
09046172 | Human serum | < 50/ml | L. interrogans 2 |
09068284 | Human serum | < 50/ml | L. borgpetersenii 1 |
09106497 | Human serum | < 50/ml | L. interrogans 2 |
09110512 | Human serum | < 50/ml | L. interrogans 4 |
09139265 | Human serum | < 50/ml | L. borgpetersenii 1 |
09162317 | Human serum | < 50/ml | L. borgpetersenii 1 |
09337238 | Human serum | < 50/ml | L. interrogans 3 |
10032221 | Human serum | < 50/ml | L. borgpetersenii 1 |
10073167 | Human serum | < 50/ml | L. interrogans 1 |
08099430 | Human serum (fatal case) | 50/ml | L. interrogans 2 |
09073008 | Human serum | 50/ml | L. interrogans 2 |
09131462 | Human serum | 55/ml | L. borgpetersenii 1 |
09117472 | Human serum | 60/ml | L. borgpetersenii 1 |
09233024 | Human serum | 200/ml | L. interrogans 1 |
08121411 | Human serum | 320/ml | L. interrogans 4 |
09100462 | Human serum | 320/ml | L. interrogans 5 |
09031188 | Human serum | 920/ml | L. interrogans 1 |
08095345 | Human serum (fatal case) | 1100/ml | L. interrogans 1 |
09043326 | Human serum | 1100/ml | L. interrogans 5 |
09210289 | Human serum | 1100/ml | L. interrogans 5 |
09145359 | Human serum | 1600/ml | L. interrogans 1 |
09044463 | Human serum (fatal case) | 5800/ml | L. interrogans 5 |
09243410 | Human serum (fatal case) | 6300/ml | L. interrogans 1 |
Deer 16 | Deer kidney | < 50/mg | L. borgpetersenii 2 |
Deer 39 | Deer kidney | < 50/mg | L. interrogans 1 |
Deer 3 | Deer kidney | 50/mg | L. interrogans 4 |
Deer 10 | Deer kidney | 80/mg | L. borgpetersenii 2 |
Deer 13 | Deer kidney | 82/mg | L. interrogans 1 |
Deer 9 | Deer kidney | 88/mg | L. borgpetersenii 2 |
Deer 14 | Deer kidney | 300/mg | L. borgpetersenii 2 |
Deer 15 | Deer kidney | 675/mg | L. borgpetersenii 2 |
Deer 21 | Deer kidney | 625/mg | L. borgpetersenii 2 |
Deer 2 | Deer kidney | 1100/mg | L. interrogans 4 |
Deer 27 | Deer kidney | 3700/mg | L. interrogans 4 |