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Table 3 Locus tags for integrases and corresponding RDFs identified in this study.

From: Excision dynamics of Vibrio pathogenicity island-2 from Vibrio cholerae: role of a recombination directionality factor VefA

 

Integrases

RDFs

Species Strain

Locus tag

Locus tag

Vibrio cholerae N16961*

VC1758

VC1785/VC1809

Vibrio cholerae TM 11079-80

VIF_001175

VIF_000799

Vibrio cholerae TMA21

VCB_002798

VCB_002857

Vibrio cholerae 12129(1)

VCG_002315

VCG_002259

Vibrio cholerae V51

VCV51_1204

VCV51_0550

Vibrio cholerae 1587

A55_1986

A55_2025

Vibrio cholerae CT 5369-93

VIH_002346

VIH_002364

Vibrio cholerae RC385

VCRC385_0574

VCRC385_3603

Vibrio cholerae TMA 21

VCB_000212

VCB_000197

Vibrio cholerae MZO-3

A51_B0496

A51_B0476

Vibrio cholerae 12129(1)

VCG_003155

VCG_003160

Vibrio cholerae N16961*

VC0516

VC0497

Vibrio cholerae MZO-3

A51_B0965

A51_B0948

Vibrio vulnificus YJO16*

VV2262

VV2261

Vibrio vulnificus YJ016*

VV0817

VV0810

Vibrio vulnificus YJO16*

VV0560

VV0515

Vibrio furnissii CIP 102972

VFA_001916

VFA_001914

Vibrio furnissii CIP 102972

VFA_000464

VFA_000468

Vibrio coralliilyticus ATCC BAA-450

VIC_001980

VIC_001987

Vibrio sp. Ex25

VEA_004301

VEA_004310

Vibrio sp. RC341

VCJ_000330

VCJ_000314

Vibrio sp. MED222

MED222_15534

MED222_15529

Vibrio splendidus 12B01

V12B01_04993

V12B01_05053

Vibrio parahaemolyticus AQ3810

A79_5467

A79_5463

Vibrio parahaemolyticus K5030

VparK_010100010115

VparK_010100010135

Vibrio parahaemolyticus AQ3810

A79_2546

A79_2541

Vibrio harveyi HY01

A1Q_2023

A1Q_2003

  1. * indicates a genome that is completely annotated