Figure 2From: Computational prediction of the Crc regulon identifies genus-wide and species-specific targets of catabolite repression control in Pseudomonas bacteriaPredicted Crc regulon of carbohydrate metabolism in Pseudomonas. Selected genes involved in carbohydrate transport and metabolism are shown along with their status vis a vis (predicted) Crc regulation. Genes from P. aeruginosa (squares), P. fluorescens (circles), P. putida (triangles) and P. syringae (diamonds) are shown, with filled/unfilled symbols indicating that the target in that species is/is not predicted to be regulated by Crc. An asterisk (*) after a symbol indicates where an orthologous locus is absent in the relevant species. OM - outer membrane; PP - periplasm; IM - inner membrane; ED - Entner-Doudoroff pathway; EMP - Embden-Meyerhoff pathway; 2-K-3-DG-6-P - 2-keto-3-deoxygluconate-6-phosphate. OprB - carbohydrate porin B; GlpF - glycerol transporter; FruAB - fructose phosphotransferase system; Mtr - mannitol transporter subunit; GtsA - glucose transporter subunit; GntP - gluconate transporter; KguT - 2-ketogluconate transporter; Mdh - mannitol dehydrogenase; AlgA - mannose-6-P isomerase; Zwf - glucose-6-P dehydrogenase; Edd - gluconate-6-P dehydratase; KguE - xylose isomerase; GapA - glyceraldehyde-3-P dehydrogenase; Eno - phosphopyruvate hydratase. Some steps of the Embden-Meyerhoff pathway are abbreviated with a dashed line for clarity.Back to article page