Clone library | OTUs observed | CHAO1 OTU estimate | % OTU coverage2 | Shannon index ± 95% confidence limits | Libshuff analysis |
---|---|---|---|---|---|
Piglet-C | 10 | 10 | 99.49 | 1.47 ± 0.15a | P < 0.0001 |
Piglet-P | 11 | 11.5 | 98.95 | 1.53 ± 0.15b | P < 0.0001 |
Finisher-C | 10 | 10 | 99.48 | 1.66 ± 0.13c | P < 0.0001 |
Finisher-P | 15 | 15 | 99.49 | 2.08 ± 0.16d | P < 0.0001 |