| S. equinus (n = 10) | Sgg (n = 6) | Sgm (n = 7) | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Index of association1 | IA | 2.092 | 2.093 | 0.329 | ||||||||||
IA S | 0.232 | 0.233 | 0.037 | |||||||||||
Gene | Gene product | A3 [bp] | A [no] | dN/dS | pms [No (%)] | SID | A [no] | dN/dS | pms [No (%)] | SID | A [no] | dN/dS | pms [No (%)] | SID |
ddlA | D-alanine-D-alanine ligase | 489 | 8 | 0.093 | 52 (10.6) | 0.956 (0.894–1.018) | 6 | 0.098 | 8 (1.6) | 1.000 (NaN7-NaN) | 2 | 2.070 | 4 (0.8) | 0.286 (-0.092–0.664) |
gki | glucokinase | 438 | 8 | 0.061 | 32 (7.3) | 0.956 (0.894–1.018) | 3 | 0.000 | 6 (1.4) | 0.600 (0.215–0.985) | 3 | −6 | 6 (1.4) | 0.714 (0.563–0.865) |
glnA | glutamine synthetase | 396 | 2 | 0.000 | 1 (0.3) | 0.200 (-0.104–0.504) | 2 | 0.000 | 3 (0.8) | 0.600 (0.600–0.600) | 1 | −6 | 0 (0) | 0 (0.000–0.000) |
mutS | DNA mismatch repair ATPase | 552 | 10 | 0.015 | 43 (7.8) | 1.000 (NaN7-NaN) | 3 | 0.037 | 17 (3.1) | 0.600 (0.215–0.985) | 4 | 0.123 | 6 (1.1) | 0.810 (0.630–0.989) |
mutS2 | mismatch repair ATPase | 495 | 10 | 0.010 | 28 (5.7) | 1.000 (NaN7-NaN) | 5 | 0.017 | 13 (2.6) | 0.933 (0.805–1.062) | 2 | 0.000 | 2 (0.4) | 0.571 (0.465–0.678) |
pheS | phenylalanyl tRNA synthetase | 480 | 8 | 0.075 | 14 (2.9) | 0.956 (0.894–1.018) | 3 | 0.000 | 11 (2.3) | 0.600 (0.215–0.985) | 2 | −6 | 1 (0.2) | 0.286 (-0.092–0.664) |
proS | prolyl tRNA synthetase | 417 | 9 | 0.046 | 59 (14.1) | 0.978 (0.927–1.028) | 4 | 0.000 | 5 (1.2) | 0.800 (0.528–1.072) | 1 | −6 | 0 (0) | 0 .000 (0.000–0.000) |
pyrE | orotate phosphoribosyl transferase | 393 | 7 | 0.040 | 21 (5.3) | 0.933 (0.871–0.995) | 5 | 0.000 | 4 (1) | 0.933 (0.805–1.062) | 3 | 0.042 | 16 (4.1) | 0.762 (0.655–0.869) |
thrS | threonyl tRNA synthetase | 573 | 7 | 0.000 | 17 (3) | 0.933 (0.871–0.995) | 4 | 0.032 | 18 (3.1) | 0.800 (0.528–1.072) | 2 | 0.096 | 87 (15.2) | 0.286 (-0.092–0.664) |
tpiA | triosephosphate isomerase | 408 | 3 | 0.049 | 7 (1.7) | 0.511 (0.200–0.822) | 2 | 0.000 | 1 (0.2) | 0.533 (0.277–0.790) | 2 | 0.000 | 1 (0.2) | 0.476 (0.183–0.769) |
Mean (95 % CI) |  |  |  |  | 0.842 (0.307–1.378) |  |  |  | 0.74 (0.393–1.087) |  |  |  | 0.419 (−0.173–1.011) |