From: Mobile genetic elements in the genome of the beneficial rhizobacterium Pseudomonas fluorescens Pf-5
Feature | Gene range | 5' end | 3' end | Size (bp) | %GC | Presence of integrase | Type of feature |
---|---|---|---|---|---|---|---|
Prophage 01 | PFL_1210 to PFL_1229 | 1386082 | 1402957 | 16875 | 62.6 | No | SfV-like prophage |
Prophage 02 | PFL_1842 to PFL_1846 | 2042157 | 2050549 | 8392 | 46.8 | Yes* | Defective prophage in tRNASer |
Prophage 03 | PFL_1976 to PFL_2019 | 2207060 | 2240619 | 33559 | 61.2 | Yes | P2-like prophage |
Prophage 04 | PFL_2119 to PFL_2127 | 2338296 | 2351794 | 13498 | 56.3 | Yes | Defective prophage in tRNAPro |
Prophage 05 | PFL_3464 to PFL_3456 | 3979487 | 3982086 | 2599 | 55.3 | Yes* | Defective prophage in tRNACys |
Prophage 06 | PFL_3739 to PFL_3780 | 4338335 | 4395005 | 56670 | 57.3 | Yes | Lambdoid prophage in tRNASer |
Genomic island 1 (PFGI-1) | PFL_4658 to PFL_4753 | 5378468 | 5493586 | 115118 | 56.4 | Yes | Putative mobile island PFGI-1 in tRNALys |
Genomic island 2 (PFGI-2) | PFL_4977 to PFL_4984 | 5728474 | 5745256 | 16782 | 51.5 | Yes | Genomic island in tRNALeu |