Development and application of the active surveillance of pathogens microarray to monitor bacterial gene flux

BMC Microbiology

Table 4 Positive ASP microarray reporters from a clinical isolate of S. maltophilia

Reporter	Annotation	BLAST match with S. maltophilia K279a
As65131772	Bacterial type II secretion system protein E	43/50
Bp63503218	30S ribosomal protein S12	45/50
Bt76501375	Heavy metal efflux pump CzcA	43/50
Pf41290909	Superoxide dismutase, Mn	47/50
Ps70052483	Acriflavin resistance protein	45/50
Se69051442	Secretion system apparatus SsaT	no hit
Tt38691142	ABC-type multidrug transport system, permease component	no hit

Five reporters predicted by ASP were also present in the S. maltophilia K279a sequence strain but two genes were specific to the clinical isolate

ISSN: 1471-2180