ID | Number of sequences of each genus | Number of cow samples containing each genus | Average % of population across all cows (std dev) | Range of population from all cows (%) |
---|---|---|---|---|
Clostridium spp | 8701 | 20 | 19.0 (3.57) | 13.9–25.4 |
Bacteroides spp | 4326 | 20 | 9.26 (2.17) | 5.2–13.7 |
Porphyromonas spp | 3435 | 20 | 7.34 (2.28) | 2.08–11.7 |
Ruminococcus spp | 3286 | 20 | 3.57 (1.5) | 0.79–6.96 |
Alistipes spp | 3051 | 20 | 6.61 (1.35) | 3.54–8.71 |
Lachnospiraceae-like | 2716 | 20 | 5.7 (2.77) | 2.31–12.2 |
Prevotella spp | 2499 | 20 | 5.47 (2.13) | 2.31–9.89 |
Porphyromonas-like | 2097 | 14 | 6.37 (2.02) | 0.61–11.21 |
Bacteroidales spp | 1871 | 20 | 4.11 (2.36) | 1.1–9.9 |
Lachnospira spp | 1753 | 20 | 3.73 (2.18) | 0.5–7.1 |
Akkermansia spp | 1464 | 19 | 3.42 (1.97) | 0.56–8.64 |
Enterococcus spp | 1335 | 20 | 2.95 (1.91) | 0.73–7.89 |
Firmicutes spp | 883 | 20 | 1.88 (0.88) | 0.36–3.9 |
Oscillospira spp | 751 | 20 | 1.59 (0.62) | 0.2–2.48 |
Prevotellaceae-like | 747 | 13 | 2.6 (3.19) | 0.1–11.03 |
Cytophaga spp | 638 | 20 | 1.35 (0.76) | 0.15–2.95 |
Eubacterium spp | 598 | 19 | 1.31 (0.53) | 0.47–2.74 |
Francisella spp | 575 | 15 | 1.65 (0.75) | 0.16–1.65 |
Clostridiales spp | 534 | 20 | 1.15 (0.58) | 0.47–2.51 |
Papillibacter spp | 498 | 18 | 1.13 (0.75) | 0.26–2.41 |
Spiroplasma spp | 490 | 19 | 1.13 (0.52) | 0.39–2.37 |
Sedimentibacter spp | 411 | 18 | 1.04 (0.77) | 0.39–3.74 |
Treponema spp | 409 | 19 | 0.93 (0.54) | 0.12–1.7 |
Victivallis spp | 371 | 13 | 1.14 (0.86) | 0.27–3.19 |
Peptococcus spp | 310 | 19 | 0.71 (0.49) | 0.16–1.94 |
Escherichia spp | 254 | 17 | 0.68 (0.75) | 0.11–3.11 |
Anaerotruncus spp | 245 | 20 | 0.54 (0.24) | 0.19–1.01 |
Anaerophaga spp | 216 | 10 | 0.9 (0.44) | 0.41–1.83 |
Acidaminococcus spp | 206 | 20 | 0.46 (0.23) | 0.15–1.16 |
Paenibacillus spp | 194 | 13 | 0.59 (0.29) | 0.13–1.15 |
Streptococcus spp | 193 | 15 | 0.55 (0.31) | 0.17–1.16 |
Fucophilus spp | 191 | 15 | 0.53 (0.26) | 0.17–1.03 |
Flavobacteriaceae spp | 191 | 11 | 0.81 (0.94) | 0.19–3.43 |
Alterococcus spp | 190 | 10 | 0.78 (0.39) | 0.26–1.53 |
Chryseobacterium spp | 187 | 15 | 0.53 (0.29) | 0.13–1.02 |
Catabacter spp | 169 | 11 | 0.64 (0.42) | 0.16–1.29 |
Unknown-clusterC | 168 | 13 | 0.56 (0.41) | 0.13–1.33 |
Peptostreptococcus spp | 149 | 15 | 0.44 (0.30) | 0.1–1.17 |
Roseburia spp | 146 | 11 | 0.59 (0.41) | 0.14–1.59 |
Sporobacter spp | 141 | 15 | 0.41 (0.29) | 0.11–1.31 |
Clostridiaceae-like | 117 | 11 | 0.45 (0.24) | 0.16–0.87 |
Acholeplasma spp | 94 | 11 | 0.37 (0.25) | 0.12–0.88 |
Unknown-clusterP | 65 | 10 | 0.29 (0.15) | 0.12–0.55 |