Table 2 LSMMG E. coli MG1655 genes down-regulated compared to the control in minimal MOPS medium.
From: Characterization of Escherichia coli MG1655 grown in a low-shear modeled microgravity environment
Gene | b# | Contran | Ave. Fold Change | Average p-value | Gene Product | Product Location | Present in S. Typhimurium |
|---|---|---|---|---|---|---|---|
yaiN | b0357 | Â | -2.28 | 0.0013 | orf, hypothetical protein | Â | orthologue |
copA | b0484 | Â | -2.21 | 0.0012 | Cu-translocating P-type ATPase resistance pump | inner mem. | present |
renD | b0542 | yes | -2.02 | 0.0005 | orf, phage λ ren gene homolog | lysis |  |
emrE | b0543 | yes | -2.02 | 0.0001 | multidrug resistance pump, methylviologen resistance | inner mem. | orthologue |
essD | b0554 | yes | -2.57 | 0.0001 | orf, phage lambda S lysis protein homolog | mem. lysis | Â |
ybcS | b0555 | yes | -2.19 | 0.0001 | orf, bacteriophage lambda lysozyme homolog | wall lysis | orthologue |
rzpD | b0556 | yes | -2.41 | 0.0001 | orf, bacteriophage lambda endopeptidase homolog | mem. disrpt. | orthologue |
ybcH | b0567 | Â | -3.17 | 0.0000 | orf, hypothetical protein | Â | Â |
cusC | b0572 | yes | -2.57 | 0.0002 | outer mem. factor of CusABC Ag & Cu efflux system | outer mem. | orthologue |
cusF | b0573 | yes | -4.06 | 0.0001 | Ag & Cu periplasmic binding protein, chaperone | periplasm | Â |
cusB | b0574 | yes | -2.16 | 0.0001 | CusABC Ag & Cu efflux periplasmic fusion protein | periplasm | Â |
cusA | b0575 | yes | -3.26 | 0.0001 | inner mem. factor of CusABC Ag & Cu transporter | inner mem. | orthologue |
ybdF | b0579 | Â | -2.47 | 0.0005 | orf, hypothetical protein | Â | Â |
uspG | b0607 | Â | -2.55 | 0.0003 | universal stress protein of UspA family, heat shock | cytoplasm | present |
yfiA | b2597 | Â | -2.50 | 0.0007 | 30S ribosome stabilizing subunit, cold shock response | cytoplasm | present |
accB* | b3255 | Â | -2.64 | 0.0001 | acetylCoA carboxylase, BCCP subunit; fatty acid bios. | cytoplasm | present |
cpxP | b3913/14 | Â | -2.50 | 0.0002 | Cpx extracytoplasmic stress response repressor | periplasmic | present |
yjaH | b4001 | Â | -2.32 | 0.0021 | orf, hypothetical protein | Â | present |
zraP | b4002 | Â | -3.84 | 0.0000 | zinc binding periplasmic protein, responds to Zn & Pb | periplasm | present |