Locus | Repeat units | Fragment size range (bps) | Number of alleles | New alleles | HDGI index (total n = 67)* | Primer conc. (μM) | |
---|---|---|---|---|---|---|---|
Multiplex A | CG3 a | 5 | 153–158 | 2 | 0.50 | 0.30 | |
bams44 a | 39 | 339–417 | 2 | 0.21 | 0.30 | ||
bams3 a | 15 | 474–609 | 7 | 1 | 0.51 | 0.30 | |
vrrB 2 c | 9 | 135–171 | 4 | 0.27 | 0.15 | ||
bams5 c | 39 | 229–385 | 5 | 2 | 0.49 | 0.30 | |
bams15 c | 9 | 409–616 | 10 | 5 | 0.62 | 0.60 | |
bams1 b | 21 | 380–485 | 5 | 0.54 | 0.15 | ||
vrrC1 b | 9 | 517–616 | 4 | 0.42 | 0.30 | ||
Multiplex B | bams13 a | 39 | 337–868 | 13 | 4 | 0.61 | 0.30 |
vrrB1 b | 9 | 193–256 | 4 | 0.36 | 0,10 | ||
bams28 b | 24 | 373–493 | 4 | 1 | 0.35 | 0.15 | |
vrrC2 b | 18 | 532–604 | 3 | 0.40 | 0.10 | ||
bams53 c | 12 | 212–236 | 2 | 0.21 | 0.60 | ||
bams31 c | 9 | 331–952 | 8 | 4 | 0.58 | 0.60 | |
Multiplex C | vrrA a | 12 | 290–326 | 4 | 0.40 | 0.06 | |
bams25 a | 15 | 376–391 | 2 | 0.11 | 0.15 | ||
bams21 a | 45 | 541–676 | 3 | 0.09 | 0.30 | ||
bams34 c | 39 | 238–581 | 5 | 0.40 | 0.30 | ||
bams24 b | 42 | 469–637 | 6 | 3 | 0.27 | 0.30 | |
Multiplex D | bams51 b | 45 | 358–538 | 4 | 0.33 | 0.60 | |
bams22 b | 36 | 555–735 | 5 | 1 | 0.34 | 0.15 | |
bams23 c | 42 | 399–651 | 5 | 2 | 0.40 | 0.30 | |
bams30 a | 9 | 268–916 | 12 | 4 | 0.71 | 0.30 | |
pXO1 b | 3 | 123–135 | 5 | 0.77 | 0.15 | ||
pXO2 a | 2 | 132–145 | 8 | 0.58 | 0.15 |