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Table 3 Results of the PCR-RFLP analysis for 11 potential GBS markers identified by htAFLP analysis

From: Identification of DNA sequence variation in Campylobacter jejuni strains associated with the Guillain-Barré syndrome by high-throughput AFLP analysis

  

marker nr (genomic localization)b

straina

disease

2 (cj0432)

3 (cj0615)

5,6 (cj0967)

7 (cj1136)

8 (cj1138)

9 (cj1139c)

11 (cj1161c)

12 (cj1306)

13 (cj1306)

14 (cj1336)

GB1

GBS

1

1

1

1

1

0

1

2

2

1

GB2

GBS

2

2

2

-

-

1

2

4

3

-

GB3

GBS

2

2

2

-

-

1

2

3

3

-

GB4

GBS

1

2

2

-

-

2

2

1

1

-

GB5

GBS

1

2

1

-

-

3

0

5

4

-

MF6

MFS

2

2

2

-

-

4

2

6

0

-

MF7

MFS

1

2

1

-

-

3

1

5

4

-

MF8

MFS

1

2

2

-

-

0

2

6

1

-

GB11

GBS

1

2

2

-

-

4

2

7

5

-

GB13

GBS

1

2

1

1

0

0

2

5

1

-

GB15

GBS

1

1

3

1

-

0

2

5

4

2

GB16

GBS

1

1

1

-

-

3

2

1

1

-

GB17

GBS

1

2

1

-

0

0

1

5

4

-

GB18

GBS

2

2

2

-

-

4

2

4

6

-

GB19

GBS

1

1

1

-

-

5

2

3

7

-

MF20

MFS

1

2

3

-

-

5

1

5

8

-

GB21

GBS

2

2

2

-

-

4

2

0

5

3

GB23

GBS

1

2

1

-

-

4

0

1

1

4

GB24

GBS

2

1

2

-

-

-

1

1

4

-

GB25

GBS

1

2

-

-

-

3

1

5

8

-

GB26

GBS

1

1

1

-

-

3

1

5

1

-

GB29

GBS

1

2

1

1

-

-

1

10

10

3

GB30

GBS

3

1

3

1

-

3

1

1

1

5

cura 7

GBS

2

2

2

-

-

4

2

8

5

3

cura 69

GBS

2

2

2

-

-

4

2

3

9

-

cura 276

GBS

2

2

2

-

-

4

2

8

5

3

260.94

GBS

2

2

2

-

-

4

4

9

5

-

E97-0737

enteritis

1

2

1

1

nd

0

1

2

1

-

E97-0747

enteritis

1

1

1

1

nd

0

2

5

10

5

E97-0796

enteritis

1

2

1

1

-

0

1

5

4

6

E97-0873

enteritis

2

3

2

-

-

0

2

5

nd

4

E97-0903

enteritis

1

2

1

1

-

2

1

11

8

-

E97-0921

enteritis

1

2

3

-

-

6

0

11

6

-

E97-0974

enteritis

1

2

1

1

1

0

nd

5

1

4

E97-0980

enteritis

1

1

1

-

-

5

1

5

1

-

E97-0998

enteritis

2

2

2

-

-

7

2

11

nd

-

E97-1013

enteritis

1

1

3

-

-

5

1

5

10

-

E98-623

enteritis

2

2

2

-

-

2

2

5

nd

4

E98-624

enteritis

2

2

2

1

-

2

2

2

nd

7

E98-682

enteritis

1

1

1

1

1

0

1

2

10

-

E98-706

enteritis

1

1

3

-

-

0

2

1

4

-

E98-1033

enteritis

1

2

3

-

-

1

1

1

1

-

E98-1087

enteritis

1

2

1

1

1

0

1

1

4

-

NCTC 11168-1

enteritis

1

1

1

1

1

0

1

5

1

4

  1. aStrains that were used in the htAFLP are indicated in bold. bThe marker numbers correspond with the marker numbers displayed in Table 3. For each marker, the different RFLP types are indicated with numbers. 0 = single band (no restriction), – = no PCR product, nd = not determined.
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BMC Microbiology

ISSN: 1471-2180

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