Table 2 Primer pairs used in this study.
From: Diversity in coding tandem repeats in related Neisseria spp.
Tandem repeat | Forward primer (5'-3') | Reverse primer (5'-3') |
|---|---|---|
TR1 | GGTCGCTGGATACGCTGC | CGGTAGCCCAAGCCTGCG |
TR2 | TGCCGGCAGCAAAGTGTCC | GCCCGTTCCAAACGACCG |
TR3 | AGCGGCAGCGGACTGCC | GTGTGCCTGCCGTGCCG |
TR4 | CAAACCGGCAGTTTGGGCG | ATGGGAAATGCGGCTGCCG |
TR4v2 | TGCTCAGCAGCCGCGAGC | GGATGAAGCGGTTGTTGCCG |
TR5 | CAGCCGTGCGCGTCTGG | TTGGCTGATGTCGGGCTGC |
TR5v2 | Â | CGGGGCGCGATGTTGACG |
TR6 | AACGCCATGCCGTCGAGC | GCCCGCGATGATGTGCCG |
TR7 | CGAAGCGACCAAAGGCATCC | GGGTCATATTCGCCGTGGTC |
TR8 | CGGTGAAACCGTTGTTGCCG | TCACGGCCGGAACCTTGC |
TR9 | CCGCCTACATCCTGTTCGG | AAAGCCGGCGATGATGCGG |
TR10 | GCGCCGAAAGTTTGGGACG | GCTTCGCCTTGTTCCACGC |
TR11 | CGCTGCCACCAATGATGTCG | TCGTAGCGGCGACTTCCG |
TR12 | GTAGAAGAAGTCGGCGAGGC | ATCGCCGTATTGCACGCCG |
TR13 | CAGCCGATTGATGGAACACG | GCCTGAAAATCTTCAGGCGG |
TR14 | TTGCCGCTCTGTTGGGCG | TGCCCGTATGCGGTCAGG |
TR14v2 | CTGTTGGGCGGTTGCGCC | CCGCGTTTGACCCTGCTG |
TR15 | GCGCATTCTAACACAACCGC | AGGAAGGGAATCTGATGCCG |
TR16 | GCATACCGCCAGAACGGC | ATACGGCCCGGAACGTCG |
TR17 | AACACGCAAACGCGGACGC | TGCGGCACGGCAGGTGC |
TR18 | CAGCAGCCAAATGCCCGC | TGCTGCGGCAGGTTTGGC |
TR19a | GCGCCCGAACCGCAACC | GTTTTTCCGCCGGTTTCGGG |
TR19b | AACGGGGCGCGGAGAAGG | GCCCGGAGAAACCAAAACGC |
TR20 | Investigated previously [15] | Â |
TR21 | GTCGCGTAGAATGCGGCG | GGAGCCTGCTCCACAACG |
TR22 | GCCGCCGCATTGCTGGC | GCCCTGCTGTTGTGCGGG |
TR23 | ATCCTGCCGCCGCCTGC | GATGACCGCGGCATCAGC |
TR24 | GTGCTTTTCGGGCAAGTGCC | CACCAATCCTACACCGTTCCC |
TR25 | CGCCCGAAGGGTTTACCG | GACACGCCGTCAATGACGC |
TR26 | GTTTCAGGGCGAGTTTGCCG | CTCGCTGTGCAGCTGCGC |
TR27 | GGGTGAAGAACGCAAAGCCC | GAGTTCAGTGCTTCGCGGC |
TR28 | GATTGGATACGCGGCAACCG | ATACGGCGGCAAGCTCCG |