Table 1 Main genomic features of the two strains of the P. citri endosymbiotic consortium already sequenced
From: Mealybugs nested endosymbiosis: going into the ‘matryoshka’ system in Planococcus citri in depth
T. princepsPCVAL | T. princepsPCIT | M. endobiaPCVAL | M. endobiaPCIT | |
|---|---|---|---|---|
GenBank accession number | CP002918 | CP002244 | CP003881 | CP002243 |
Genome size (bp) | 138931 | 138927 | 538203 | 538294 |
Total gene number | 130 | 136 | 458 | 452 |
CDSs | 116 | 121 | 411 | 406 |
rRNAs | 6 | 6 | 5 | 5 |
tRNAs | 7 | 8 | 41 | 41 |
Small RNA genes | 1 | 1 | 1 | 0 |
Pseudogenes | 19 (CDS) 6 (tRNA) | 19 (CDS) 4 (tRNA) | 25 (CDS) | 23 (CDS) |
Overall gene density (%) | 71.2 | 72.9 | 79.3 | 79.0 |
Average ORF length (bp) | 775 | 760 | 1012 | 1022 |
Average IGRs (bp) | 466.8 | 389.0 | 260.3 | 268.0 |
G + C content (%) | 59.0 | 58.8 | 44.0 | 43.5 |
genes | 58.6 | 58.5 | 45.5 | 45.4 |
pseudogenes | 58.8 | 59.9 | 43.6 | 44.7 |
IGR | 59.4 | 59.5 | 36.0 | 36.2 |