Table 5 Frequency of carriage of CJIE1 prophage and ORF11 within the predominant multi-locus sequence types (ST)
ST | Total in each ST | No CJIE1 no Orf 11 (%) | With CJIE1 alone (%) | With CJIE1 + ORF11 (%) |
|---|---|---|---|---|
8 | 10 | 9/10 (90) | 0 | 1/10 (10) |
21 | 25 | 16/25 (64) | 4/25 (16) | 5/25 (20) |
42 | 15 | 8/15 (53) | 7/15 (47) | 0 |
45 | 91 | 84/91 (92) | 5/91 (6) | 2/91 (2) |
48 | 11 | 8/11 (73) | 0 | 3/11 (27) |
50 | 9 | 7/9 (78) | 2/9 (22) | 0 |
52 | 7 | 7/7 (100) | 0 | 0 |
61 | 7 | 7/7 (100) | 0 | 0 |
137 | 2 | 0 | 2/2 (100) | 0 |
267 | 8 | 7/8 (88) | 1/8 (12) | 0 |
353 | 8 | 7/8 (88) | 1/8 (12) | 0 |
429 | 3 | 0 | 3/3 (100) | 0 |
459 | 15 | 14/15 (93) | 0 | 1/93 (7) |
460 | 9 | 7/9 (78) | 1/9 (11) | 1/9 (11) |
508 | 7 | 6/7 (86) | 0 | 1/7 (14) |
806 | 8 | 7/8 (88) | 1/8 (12) | 0 |
922 | 13 | 13/13 (100) | 0 | 0 |
929 | 13 | 13/13 (100) | 0 | 0 |
939 | 2 | 0 | 2/2 (100) | 0 |
982 | 38 | 27/38 (71) | 5/38 (13) | 6/38 (16) |
1068 | 14 | 12/14 (86) | 2/14 (14) | 0 |
Total | 315 | 259/315 (82) | 36/315 (11) | 20/315 (6) |