Table 2 Metagenome overview
Metagenome | OF1 | OF2 | Tplain | Tpm1-1 | Tpm1-2 | Tpm2 | Tpm3 |
|---|---|---|---|---|---|---|---|
Total sequence (M bases) | 342 | 347 | 297 | 239 | 425 | 208 | 303 |
Total reads | 914076 | 918989 | 850039 | 663131 | 1227131 | 607557 | 898796 |
Average read length (bases) | 374 ± 128 | 378 ± 128 | 349 ± 134 | 361 ± 131 | 346 ± 131 | 343 ± 131 | 337 ± 131 |
Average GC content (%) | 48.9 ± 10.7 | 47.5 ± 10.9 | 53.9 ± 10.7 | 49.9 ± 11.5 | 50.6 ± 12.0 | 49.3 ± 11.8 | 49.8 ± 11.0 |
EGS Mbp | 4.9 | 4.8 | 5.1 | 4.7 | 5.0 | 4.6 | 5.0 |
Total reads assigned to the 16S rRNA gene1 | 926 | 914 | 861 | 776 | 1358 | 671 | 936 |
(% of total reads) | 0.10 | 0.10 | 0.10 | 0.12 | 0.11 | 0.11 | 0.10 |
Total tDNA reads1 | 3256 | 3637 | 2235 | 2134 | 3481 | 2073 | 2529 |
(% of total reads) | 0.36 | 0.40 | 0.26 | 0.32 | 0.28 | 0.34 | 0.28 |